RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PHF13Q86YI8 300 aaPredicted RBP19.3■□□□□ 0.68
RFFL-211ENST00000584541 SIX6OS1Q8N1H7 587 aa19.3■□□□□ 0.68
RFFL-211ENST00000584541 EFHBQ8N7U6 833 aa19.3■□□□□ 0.68
RFFL-211ENST00000584541 GIPC2Q8TF65 315 aa19.3■□□□□ 0.68
RFFL-211ENST00000584541 TRIM11Q96F44 468 aa19.3■□□□□ 0.68
RFFL-211ENST00000584541 CPXM1Q96SM3 734 aa19.3■□□□□ 0.68
RFFL-211ENST00000584541 EIF3CQ99613 913 aaKnown RBP19.3■□□□□ 0.68
RFFL-211ENST00000584541 SLC4A5Q9BY07 1137 aa19.3■□□□□ 0.68
RFFL-211ENST00000584541 COMMD8Q9NX08 183 aa19.3■□□□□ 0.68
RFFL-211ENST00000584541 ADAM22Q9P0K1 906 aa19.3■□□□□ 0.68
RFFL-211ENST00000584541 CYTH4Q9UIA0 394 aa19.3■□□□□ 0.68
RFFL-211ENST00000584541 ASB3Q9Y575 518 aa19.3■□□□□ 0.68
RFFL-211ENST00000584541 CHD7Q9P2D1 2997 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 SLC38A8A6NNN8 435 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 HHLA1C9JL84 531 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 NCK2O43639 380 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 HNRNPA1P09651 372 aaKnown RBP eCLIP19.29■□□□□ 0.68
RFFL-211ENST00000584541 CSH1P0DML2 217 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 CSH2P0DML3 217 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 LCP1P13796 627 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 MMP8P22894 467 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 HOXA9P31269 272 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 SLC5A3P53794 718 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 KRT83P78385 493 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 C1QBPQ07021 282 aaKnown RBP19.29■□□□□ 0.68
RFFL-211ENST00000584541 ADIGQ0VDE8 80 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 ADGRE1Q14246 886 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 MTF1Q14872 753 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 PTPN20Q4JDL3 420 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 SDHAF4Q5VUM1 108 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 TMEM110Q86TL2 294 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 C18orf8Q96DM3 657 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 VCPIP1Q96JH7 1222 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 ZNF512Q96ME7 567 aaPredicted RBP19.29■□□□□ 0.68
RFFL-211ENST00000584541 C11orf70Q9BRQ4 267 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 ISCUQ9H1K1 167 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 FBXO44Q9H4M3 255 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 ZDHHC7Q9NXF8 308 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 TAS2R14Q9NYV8 317 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 STRIP2Q9ULQ0 834 aa19.29■□□□□ 0.68
RFFL-211ENST00000584541 FAM170AA1A519 330 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 E5RJQ4 531 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 XYLBO75191 536 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 FBXO21O94952 628 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 LCA5LO95447 670 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 GTF2F1P35269 517 aaKnown RBP eCLIP19.28■□□□□ 0.68
RFFL-211ENST00000584541 RPL34P49207 117 aaKnown RBP19.28■□□□□ 0.68
RFFL-211ENST00000584541 TKTL1P51854 596 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 IFRD2Q12894 506 aaPredicted RBP19.28■□□□□ 0.68
RFFL-211ENST00000584541 RAB41Q5JT25 222 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 MMS22LQ6ZRQ5 1243 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 ZDHHC17Q8IUH5 632 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 MICALL1Q8N3F8 863 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 TXLNBQ8N3L3 684 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 GPR152Q8TDT2 470 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 SFXN1Q9H9B4 322 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 CNGB3Q9NQW8 809 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 WDR35Q9P2L0 1181 aa19.28■□□□□ 0.68
RFFL-211ENST00000584541 LAMA3Q16787 3333 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 SZT2Q5T011 3432 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 PIK3R2O00459 728 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 TNFRSF10BO14763 440 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 H2AFZP0C0S5 128 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 MYBL1P10243 752 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 YWHAQP27348 245 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 MAGEA1P43355 309 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 GABRB2P47870 512 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 KCNC3Q14003 757 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 TMEM184AQ6ZMB5 413 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 H2AFVQ71UI9 128 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 Q7L0L9 218 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 MON1BQ7L1V2 547 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 GPRIN1Q7Z2K8 1008 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 MCOLN2Q8IZK6 566 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 DEFB123Q8N688 67 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 PSMG2Q969U7 264 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 ZNF830Q96NB3 372 aaPredicted RBP19.27■□□□□ 0.68
RFFL-211ENST00000584541 UXTQ9UBK9 157 aaPredicted RBP19.27■□□□□ 0.68
RFFL-211ENST00000584541 NENFQ9UMX5 172 aa19.27■□□□□ 0.68
RFFL-211ENST00000584541 MAGED2Q9UNF1 606 aaPredicted RBP19.27■□□□□ 0.68
RFFL-211ENST00000584541 ANKRD62A6NC57 917 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 CCL16O15467 120 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 SART1O43290 800 aaKnown RBP19.26■□□□□ 0.67
RFFL-211ENST00000584541 ERBB2P04626 1255 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 ABCB4P21439 1286 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 ZNF268Q14587 947 aaPredicted RBP19.26■□□□□ 0.67
RFFL-211ENST00000584541 CYP4A22Q5TCH4 519 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 OR6B2Q6IFH4 312 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 TOGARAM2Q6ZUX3 1019 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 DNAJB7Q7Z6W7 309 aaPredicted RBP19.26■□□□□ 0.67
RFFL-211ENST00000584541 SCAMP5Q8TAC9 235 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 MYLIPQ8WY64 445 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 CTNNBL1Q8WYA6 563 aaPredicted RBP19.26■□□□□ 0.67
RFFL-211ENST00000584541 ZNF653Q96CK0 615 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 TRIM44Q96DX7 344 aaPredicted RBP19.26■□□□□ 0.67
RFFL-211ENST00000584541 SLITRK1Q96PX8 696 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 CDX2Q99626 313 aaPredicted RBP19.26■□□□□ 0.67
RFFL-211ENST00000584541 ULBP1Q9BZM6 244 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 KCNF1Q9H3M0 494 aa19.26■□□□□ 0.67
RFFL-211ENST00000584541 INTUQ9ULD6 942 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms