RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 LRRC52Q8N7C0 313 aa9.36□□□□□ -0.91
NUP85-223ENST00000583877 WHAMMQ8TF30 809 aa9.36□□□□□ -0.91
NUP85-223ENST00000583877 LRRC15Q8TF66 581 aa9.36□□□□□ -0.91
NUP85-223ENST00000583877 POMGNT1Q8WZA1 660 aa9.36□□□□□ -0.91
NUP85-223ENST00000583877 FNBP1Q96RU3 617 aa9.36□□□□□ -0.91
NUP85-223ENST00000583877 ZHX3Q9H4I2 956 aa9.36□□□□□ -0.91
NUP85-223ENST00000583877 BLOC1S4Q9NUP1 217 aa9.36□□□□□ -0.91
NUP85-223ENST00000583877 L1RE1Q9UN81 338 aa9.36□□□□□ -0.91
NUP85-223ENST00000583877 ASXL3Q9C0F0 2248 aa9.36□□□□□ -0.91
NUP85-223ENST00000583877 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 FAM221BA6H8Z2 402 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 MYMKA6NI61 221 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 H0Y626 953 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 TRIM16O95361 564 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 ITGB3P05106 788 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 HNRNPLP14866 589 aaKnown RBP eCLIP9.35□□□□□ -0.91
NUP85-223ENST00000583877 PCSK1P29120 753 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 ADSSP30520 456 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 POLR2BP30876 1174 aaKnown RBP9.35□□□□□ -0.91
NUP85-223ENST00000583877 RDXP35241 583 aaKnown RBP9.35□□□□□ -0.91
NUP85-223ENST00000583877 HOXD12P35452 270 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 EIF2DP41214 584 aaKnown RBP9.35□□□□□ -0.91
NUP85-223ENST00000583877 UBA7P41226 1012 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 PTGER3P43115 390 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 MAGEA11P43364 429 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 MAPK8P45983 427 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 LHX1P48742 406 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 ZXDBP98169 803 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 MCM6Q14566 821 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 MCTP1Q6DN14 999 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 FAM171BQ6P995 826 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 TTC30AQ86WT1 665 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 SPATA2LQ8IUW3 424 aaPredicted RBP9.35□□□□□ -0.91
NUP85-223ENST00000583877 SCN4BQ8IWT1 228 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 TMEFF1Q8IYR6 380 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 TOP6BLQ8N6T0 577 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 C1orf127Q8N9H9 656 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 TXNDC5Q8NBS9 432 aaKnown RBP9.35□□□□□ -0.91
NUP85-223ENST00000583877 CACTINQ8WUQ7 758 aaKnown RBP9.35□□□□□ -0.91
NUP85-223ENST00000583877 RLN3Q8WXF3 142 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 RAD54LQ92698 747 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 HVCN1Q96D96 273 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 SPATA17Q96L03 361 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 CEP295NLQ96MC4 621 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 POLMQ9NP87 494 aaPredicted RBP9.35□□□□□ -0.91
NUP85-223ENST00000583877 TMEM74BQ9NUR3 256 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 GDAP2Q9NXN4 497 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 MBD1Q9UIS9 605 aaPredicted RBP9.35□□□□□ -0.91
NUP85-223ENST00000583877 PILRBQ9UKJ0 227 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 KLK13Q9UKR3 277 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 ITGA11Q9UKX5 1188 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 AGAP1Q9UPQ3 857 aa9.35□□□□□ -0.91
NUP85-223ENST00000583877 FLNBO75369 2602 aaKnown RBP9.35□□□□□ -0.91
NUP85-223ENST00000583877 CKAP5Q14008 2032 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 A0A0A0MRY4 1105 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 SPAARA0A1B0GVQ0 90 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 ANTXRLA6NF34 631 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 SGK1O00141 431 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 LEFTY2O00292 366 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 SLC9A3R1O14745 358 aaPredicted RBP9.34□□□□□ -0.91
NUP85-223ENST00000583877 GABRDO14764 452 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 KLF8O95600 359 aaPredicted RBP9.34□□□□□ -0.91
NUP85-223ENST00000583877 APODP05090 189 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 CYP17A1P05093 508 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 CD46P15529 392 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 PLCG1P19174 1290 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 TNFRSF4P43489 277 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 PPP3CCP48454 512 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 SIM1P81133 766 aaPredicted RBP9.34□□□□□ -0.91
NUP85-223ENST00000583877 SLC7A9P82251 487 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 TFAMQ00059 246 aaKnown RBP9.34□□□□□ -0.91
NUP85-223ENST00000583877 MAP7D1Q3KQU3 841 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 EOGTQ5NDL2 527 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 LYSMD4Q5XG99 296 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 VSTM1Q6UX27 236 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 C4orf50Q6ZRC1 276 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 ARMCX6Q7L4S7 300 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 ZNF720Q7Z2F6 126 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 FILIP1Q7Z7B0 1213 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 OSTM1Q86WC4 334 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 ADGRF2Q8IZF7 708 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 ADGRG2Q8IZP9 1017 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 HDDC3Q8N4P3 179 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 ALLCQ8N6M5 410 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 FRMD1Q8N878 549 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 IL17RCQ8NAC3 791 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 RASSF8Q8NHQ8 419 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 CEP76Q8TAP6 659 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 CXorf38Q8TB03 319 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 KCNK17Q96T54 332 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 PNKPQ96T60 521 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 EHD2Q9NZN4 543 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 TRPM5Q9NZQ8 1165 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 BCCIPQ9P287 314 aaKnown RBP eCLIP9.34□□□□□ -0.91
NUP85-223ENST00000583877 KIF3AQ9Y496 699 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 SNX9Q9Y5X1 595 aa9.34□□□□□ -0.91
NUP85-223ENST00000583877 TAF4O00268 1085 aa9.33□□□□□ -0.92
NUP85-223ENST00000583877 AP5Z1O43299 807 aa9.33□□□□□ -0.92
NUP85-223ENST00000583877 KAT7O95251 611 aa9.33□□□□□ -0.92
NUP85-223ENST00000583877 OLFM2O95897 454 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms