RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 MTMR12Q9C0I1 747 aa21.87■■□□□ 1.09
SRSF1-206ENST00000583741 SEL1LQ9UBV2 794 aa21.87■■□□□ 1.09
SRSF1-206ENST00000583741 ITGA11Q9UKX5 1188 aa21.87■■□□□ 1.09
SRSF1-206ENST00000583741 EXOC7Q9UPT5 735 aa21.87■■□□□ 1.09
SRSF1-206ENST00000583741 LNP1A1A4G5 178 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 C4orf47A7E2U8 309 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 GIPC1O14908 333 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 KLRC4O43908 158 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 ATP2C2O75185 946 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 RHOBTB1O94844 696 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 CAVIN2O95810 425 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 KRT19P08727 400 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 GBP1P32455 592 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 DGKEP52429 567 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 ZXDBP98169 803 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 MORC3Q14149 939 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 SOWAHAQ2M3V2 549 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 TOP6BLQ8N6T0 577 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 CACTINQ8WUQ7 758 aaKnown RBP21.86■■□□□ 1.09
SRSF1-206ENST00000583741 FUBP3Q96I24 572 aaKnown RBP eCLIP21.86■■□□□ 1.09
SRSF1-206ENST00000583741 TPSD1Q9BZJ3 242 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 PDE11AQ9HCR9 933 aa21.86■■□□□ 1.09
SRSF1-206ENST00000583741 RALYQ9UKM9 306 aaKnown RBP21.86■■□□□ 1.09
SRSF1-206ENST00000583741 PVALEFA0A1B0GWK0 134 aa21.85■■□□□ 1.09
SRSF1-206ENST00000583741 GCNT3O95395 438 aa21.85■■□□□ 1.09
SRSF1-206ENST00000583741 OPRD1P41143 372 aa21.85■■□□□ 1.09
SRSF1-206ENST00000583741 KCNB1Q14721 858 aa21.85■■□□□ 1.09
SRSF1-206ENST00000583741 FAM171BQ6P995 826 aa21.85■■□□□ 1.09
SRSF1-206ENST00000583741 UNC13DQ70J99 1090 aa21.85■■□□□ 1.09
SRSF1-206ENST00000583741 TSTD1Q8NFU3 115 aa21.85■■□□□ 1.09
SRSF1-206ENST00000583741 SPATA18Q8TC71 538 aa21.85■■□□□ 1.09
SRSF1-206ENST00000583741 USP33Q8TEY7 942 aa21.85■■□□□ 1.09
SRSF1-206ENST00000583741 ARHGAP26Q9UNA1 814 aa21.85■■□□□ 1.09
SRSF1-206ENST00000583741 PTPRJQ12913 1337 aa21.85■■□□□ 1.09
SRSF1-206ENST00000583741 IDEP14735 1019 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 TCF3P15923 654 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 GAP43P17677 238 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 HDCP19113 662 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 GARTP22102 1010 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 PCSK1P29120 753 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 MAGEA11P43364 429 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 LHX1P48742 406 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 NOVA1P51513 510 aaKnown RBP21.84■■□□□ 1.09
SRSF1-206ENST00000583741 SEC13P55735 322 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 PSMC1P62191 440 aaKnown RBP21.84■■□□□ 1.09
SRSF1-206ENST00000583741 RBP5P82980 135 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 GSE1Q14687 1217 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 GAB4Q2WGN9 574 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 DPCR1Q3MIW9 517 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 KMT5BQ4FZB7 885 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 ANO6Q4KMQ2 910 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 C2orf27AQ580R0 203 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 PMS2CLQ68D20 193 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 LMBRD2Q68DH5 695 aaPredicted RBP21.84■■□□□ 1.09
SRSF1-206ENST00000583741 GAS2L3Q86XJ1 694 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 KBTBD7Q8WVZ9 684 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 EXOC1Q9NV70 894 aa21.84■■□□□ 1.09
SRSF1-206ENST00000583741 K7EQS6 105 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 RHOBTB3O94955 611 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 LDHAP00338 332 aaKnown RBP21.83■■□□□ 1.09
SRSF1-206ENST00000583741 BCKDHBP21953 392 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 LMO2P25791 158 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 USP46P62068 366 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 ANO7Q6IWH7 933 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 RASSF3Q86WH2 238 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 NOC3LQ8WTT2 800 aaKnown RBP21.83■■□□□ 1.09
SRSF1-206ENST00000583741 MYLPFQ96A32 169 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 SYT15Q9BQS2 421 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 PCIF1Q9H4Z3 704 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 CRTAC1Q9NQ79 661 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 OLFML3Q9NRN5 406 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 ZFYVE26Q68DK2 2539 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 MYOFQ9NZM1 2061 aa21.83■■□□□ 1.09
SRSF1-206ENST00000583741 PATE3B3GLJ2 98 aa21.83■■□□□ 1.08
SRSF1-206ENST00000583741 NFATC1O95644 943 aa21.83■■□□□ 1.08
SRSF1-206ENST00000583741 BMP6P22004 513 aa21.83■■□□□ 1.08
SRSF1-206ENST00000583741 NR1H3Q13133 447 aa21.83■■□□□ 1.08
SRSF1-206ENST00000583741 LIMS2Q7Z4I7 341 aa21.83■■□□□ 1.08
SRSF1-206ENST00000583741 CCDC65Q8IXS2 484 aa21.83■■□□□ 1.08
SRSF1-206ENST00000583741 SYCP3Q8IZU3 236 aa21.83■■□□□ 1.08
SRSF1-206ENST00000583741 MDGA1Q8NFP4 955 aa21.83■■□□□ 1.08
SRSF1-206ENST00000583741 OR5B17Q8NGF7 314 aa21.83■■□□□ 1.08
SRSF1-206ENST00000583741 PANK4Q9NVE7 773 aa21.83■■□□□ 1.08
SRSF1-206ENST00000583741 TNRC6BQ9UPQ9 1833 aaKnown RBP21.83■■□□□ 1.08
SRSF1-206ENST00000583741 TMEM191BP0C7N4 346 aa21.82■■□□□ 1.08
SRSF1-206ENST00000583741 USP39Q53GS9 565 aaKnown RBP21.82■■□□□ 1.08
SRSF1-206ENST00000583741 ZNF658Q5TYW1 1059 aaPredicted RBP21.82■■□□□ 1.08
SRSF1-206ENST00000583741 C4orf50Q6ZRC1 276 aa21.82■■□□□ 1.08
SRSF1-206ENST00000583741 C11orf57Q6ZUT1 292 aaPredicted RBP21.82■■□□□ 1.08
SRSF1-206ENST00000583741 SFTPA1Q8IWL2 248 aa21.82■■□□□ 1.08
SRSF1-206ENST00000583741 CCDC33Q8N5R6 958 aa21.82■■□□□ 1.08
SRSF1-206ENST00000583741 SPATA17Q96L03 361 aa21.82■■□□□ 1.08
SRSF1-206ENST00000583741 CNOT6LQ96LI5 555 aaKnown RBP21.82■■□□□ 1.08
SRSF1-206ENST00000583741 INTS13Q9NVM9 706 aa21.82■■□□□ 1.08
SRSF1-206ENST00000583741 PCDHB13Q9Y5F0 798 aa21.82■■□□□ 1.08
SRSF1-206ENST00000583741 ASCC3Q8N3C0 2202 aaKnown RBP21.81■■□□□ 1.08
SRSF1-206ENST00000583741 FRMD3A2A2Y4 597 aa21.81■■□□□ 1.08
SRSF1-206ENST00000583741 C1QTNF9BB2RNN3 333 aa21.81■■□□□ 1.08
SRSF1-206ENST00000583741 LEFTY2O00292 366 aa21.81■■□□□ 1.08
SRSF1-206ENST00000583741 PROS1P07225 676 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms