RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 ACO2Q99798 780 aaKnown RBP8.61□□□□□ -1.03
PPP4R1-225ENST00000583438 MMTAG2Q9BU76 263 aaKnown RBP8.61□□□□□ -1.03
PPP4R1-225ENST00000583438 TARS2Q9BW92 718 aaKnown RBP8.61□□□□□ -1.03
PPP4R1-225ENST00000583438 TMPRSS13Q9BYE2 586 aa8.61□□□□□ -1.03
PPP4R1-225ENST00000583438 BHMT2Q9H2M3 363 aa8.61□□□□□ -1.03
PPP4R1-225ENST00000583438 NCDNQ9UBB6 729 aa8.61□□□□□ -1.03
PPP4R1-225ENST00000583438 DPP7Q9UHL4 492 aa8.61□□□□□ -1.03
PPP4R1-225ENST00000583438 THADAQ6YHU6 1953 aa8.61□□□□□ -1.03
PPP4R1-225ENST00000583438 OTOL1A6NHN0 477 aaPredicted RBP8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 SLC38A8A6NNN8 435 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 CHURC1-FNTBB4DL54 471 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 C9orf172C9J069 976 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 E9PMD0 336 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 PODXLO00592 558 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 FAM189A1O60320 539 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 MARCH6O60337 910 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 BAG4O95429 457 aaKnown RBP8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 PRAMEF12O95522 483 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 ADRB1P08588 477 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 XRCC6P12956 609 aaKnown RBP eCLIP8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 ATF2P15336 505 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 FNTBP49356 437 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 KCNMA1Q12791 1236 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 TWF1Q12792 350 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 CAMK2GQ13555 558 aaPredicted RBP8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 PWP1Q13610 501 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 SEPT6Q14141 434 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 CCDC6Q16204 474 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 UVSSAQ2YD98 709 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 EXOSC6Q5RKV6 272 aaKnown RBP8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 GAREM2Q75VX8 874 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 ZBTB8OSQ8IWT0 167 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 TCEAL8Q8IYN2 117 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 HACE1Q8IYU2 909 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 MCPH1Q8NEM0 835 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 BEST2Q8NFU1 509 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 TTC8Q8TAM2 541 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 DNASE1L2Q92874 299 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 GAL3ST3Q96A11 431 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 SHDQ96IW2 340 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 SMOC1Q9H4F8 434 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 CYP4F11Q9HBI6 524 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 KRT82Q9NSB4 513 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 GDE1Q9NZC3 331 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 ARHGAP28Q9P2N2 729 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 TNFSF13BQ9Y275 285 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 TIMM13Q9Y5L4 95 aaPredicted RBP8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 PIAS3Q9Y6X2 628 aa8.6□□□□□ -1.03
PPP4R1-225ENST00000583438 BAHCC1Q9P281 2608 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 PLXND1Q9Y4D7 1925 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 MEGF11A6BM72 1044 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 HEPACAM2A8MVW5 462 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 EPB41L2O43491 1005 aaKnown RBP8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 CDKL5O76039 1030 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 GARTP22102 1010 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 CCNE1P24864 410 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 ERCC5P28715 1186 aaPredicted RBP8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 GDI1P31150 447 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 TNFSF9P41273 254 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 CHRNA4P43681 627 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 PEX3P56589 373 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 LMNB2Q03252 620 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 FAM160A1Q05DH4 1040 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 TNK2Q07912 1038 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 ELAVL2Q12926 359 aaKnown RBP8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 DCAF4L1Q3SXM0 396 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 ZNF568Q3ZCX4 644 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 CPLX2Q6PUV4 134 aaKnown RBP8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 ZNF852Q6ZMS4 543 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 ANKS3Q6ZW76 656 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 STKLD1Q8NE28 680 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 DEPTORQ8TB45 409 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 ZSCAN18Q8TBC5 510 aaPredicted RBP8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 ATRIPQ8WXE1 791 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 TBC1D32Q96NH3 1257 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 PGLYRP2Q96PD5 576 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 NACC1Q96RE7 527 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 NAP1L4Q99733 375 aaKnown RBP8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 IKZF4Q9H2S9 585 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 LMAN1LQ9HAT1 526 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 TRPV4Q9HBA0 871 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 ADAMTS1Q9UHI8 967 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 USP18Q9UMW8 372 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 YIPF1Q9Y548 306 aa8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 ASCC3Q8N3C0 2202 aaKnown RBP8.59□□□□□ -1.03
PPP4R1-225ENST00000583438 PHLPP2Q6ZVD8 1323 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 NPHP3-ACAD11A0A0J9YXS1 232 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 ARHGEF35A5YM69 484 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 HIP1RO75146 1068 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 OR52Z1P0C646 297 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 CXCL8P10145 99 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 HARSP12081 509 aaKnown RBP8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 MYL4P12829 197 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 KCNE1P15382 129 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 PTPN2P17706 415 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 NOS3P29474 1203 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 PI4KAP42356 2102 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 PFKPQ01813 784 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 NCBP1Q09161 790 aaKnown RBP8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 SF3A2Q15428 464 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms