RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 GRIK1P39086 918 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 GABRB2P47870 512 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 RGS7P49802 495 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 C1QBPQ07021 282 aaKnown RBP17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PDCLQ13371 301 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PTPN20Q4JDL3 420 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 C8orf48Q96LL4 319 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CPXM1Q96SM3 734 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PACSIN1Q9BY11 444 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 DMAP1Q9NPF5 467 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 LUC7LQ9NQ29 371 aaKnown RBP17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CYLDQ9NQC7 956 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PPP2R2CQ9Y2T4 447 aa17.25■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 RCCD1A6NED2 376 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 FAM86C2PA6NEL3 165 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 F8VP50 259 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PJA2O43164 708 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TGM5O43548 720 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 C1RP00736 705 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ADH1AP07327 375 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CCDC175P0C221 793 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 KLRC2P26717 231 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ACADSBP45954 432 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TUFMP49411 452 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 VAV2P52735 878 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 MMS22LQ6ZRQ5 1243 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 MON1BQ7L1V2 547 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TTC9BQ8N6N2 239 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 KIAA1524Q8TCG1 905 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 C18orf8Q96DM3 657 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 UBE2ZQ9H832 354 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PNPLA8Q9NP80 782 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ZKSCAN5Q9Y2L8 839 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 HCN4Q9Y3Q4 1203 aa17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ARIH1Q9Y4X5 557 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PTPRDP23468 1912 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TRIM66O15016 1216 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 GPR37L1O60883 481 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CLASP2O75122 1294 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CSPG5O95196 566 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ERBB2P04626 1255 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CALB1P05937 261 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TMEM253P0C7T8 217 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ELF1P32519 619 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SNX16P57768 344 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 GPC5P78333 572 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ZNF268Q14587 947 aaPredicted RBP17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 DDR2Q16832 855 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 MGAT5BQ3V5L5 792 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 C2CD6Q53TS8 623 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 RAB41Q5JT25 222 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ZNF662Q6ZS27 426 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 KIAA1328Q86T90 577 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SCN4BQ8IWT1 228 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TCEAL8Q8IYN2 117 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 MSANTD4Q8NCY6 345 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 C11orf70Q9BRQ4 267 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 THAP2Q9H0W7 228 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CYP4F11Q9HBI6 524 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ST7Q9NRC1 585 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TJP2Q9UDY2 1190 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TFR2Q9UP52 801 aa17.23■□□□□ 0.35
CDK5RAP3-228ENST00000583363 MYH10P35580 1976 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 A0A0U1RQJ8 604 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TNFRSF10BO14763 440 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CYP1A2P05177 515 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 MYBL1P10243 752 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ABCB4P21439 1286 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 GPR15P49685 360 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 RPL10AP62906 217 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 REXO1L1PQ8IX06 675 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TXLNBQ8N3L3 684 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ATRIPQ8WXE1 791 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TRIM11Q96F44 468 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SPATA17Q96L03 361 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SEPT5Q99719 369 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 LACRTQ9GZZ8 138 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 MIS12Q9H081 205 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 LRRC4Q9HBW1 653 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 KCND1Q9NSA2 647 aa17.22■□□□□ 0.35
CDK5RAP3-228ENST00000583363 MYO7AQ13402 2215 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 E5RJQ4 531 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PI4K2BG5E9Z4 385 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PIK3R2O00459 728 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ZSCAN12O43309 604 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SOAT2O75908 522 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SPATA31D3P0C874 917 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 LCP1P13796 627 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 KCNA5P22460 613 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 RRM1P23921 792 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CLCN4P51793 760 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 GSCP56915 257 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PTPROQ16827 1216 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 LEXMQ3ZCV2 418 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CYP4A22Q5TCH4 519 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 LIN9Q5TKA1 542 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms