RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 CYP2C9P11712 490 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 NPR1P16066 1061 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 HOXB6P17509 224 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 PLCD1P51178 756 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 POLGP54098 1239 aaPredicted RBP5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 PRKAG1P54619 331 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 FOXG1P55316 489 aaPredicted RBP5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 WNT3P56703 355 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 FAM187BQ17R55 369 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 MGAT5BQ3V5L5 792 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 IFIT1BQ5T764 474 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 SHC4Q6S5L8 630 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 BCDIN3DQ7Z5W3 292 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 KRT73Q86Y46 540 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 ANKRD13AQ8IZ07 590 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 BPIFB1Q8TDL5 484 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 DIS3LQ8TF46 1054 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 C1GALT1C1Q96EU7 318 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 FAM118BQ9BPY3 351 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 C17orf80Q9BSJ5 609 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 TCF7L1Q9HCS4 588 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 AASDHPPTQ9NRN7 309 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 TRMT13Q9NUP7 481 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 NCAPD3P42695 1498 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 CCNB3Q8WWL7 1395 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 A0A087WWL8 130 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 TMEM233B4DJY2 109 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 FCHO1O14526 889 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 OFD1O75665 1012 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 LAMB3Q13751 1172 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 FGL2Q14314 439 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 MLC1Q15049 377 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 PLA1AQ53H76 456 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 AWAT1Q58HT5 328 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 MTHFD1LQ6UB35 978 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 GAS2L3Q86XJ1 694 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 RAPGEF4Q8WZA2 1011 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 CHMP4AQ9BY43 222 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 TRIM54Q9BYV2 358 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 MS4A7Q9GZW8 240 aaPredicted RBP5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 PIH1D1Q9NWS0 290 aaKnown RBP5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 LPAR3Q9UBY5 353 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 KIF27Q86VH2 1401 aa5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 THOC2Q8NI27 1593 aaKnown RBP5.04□□□□□ -1.6
SMCHD1-208ENST00000583344 SOCS2O14508 198 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 AP1G1O43747 822 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 GCATO75600 419 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 THP07101 528 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 VCAM1P19320 739 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 HTR1BP28222 390 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 CTBP1Q13363 440 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 PTCHD3Q3KNS1 767 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 LMBRD2Q68DH5 695 aaPredicted RBP5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 ZNF517Q6ZMY9 492 aaPredicted RBP5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 ZNF813Q6ZN06 617 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 COL23A1Q86Y22 540 aaPredicted RBP5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 PPP1R35Q8TAP8 253 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 WASF1Q92558 559 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 TMEM79Q9BSE2 394 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 GBA2Q9HCG7 927 aaPredicted RBP5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 AMFRQ9UKV5 643 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 ANKRD6Q9Y2G4 727 aa5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMCHD1-208ENST00000583344 ARHGAP35Q9NRY4 1499 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 A0A088AWK7 358 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 CCER2I3L3R5 266 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 CES2O00748 559 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 DSCR3O14972 297 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 ABLIM3O94929 683 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 FGAP02671 866 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 MYCLP12524 364 aaPredicted RBP5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 XRCC6P12956 609 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 ARFIP2P53365 341 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 ZNF783Q6ZMS7 281 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 IRF2BP2Q7Z5L9 587 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 DENND1CQ8IV53 801 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 MPP5Q8N3R9 675 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 SIRT6Q8N6T7 355 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 PPP2R3CQ969Q6 453 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 ZMAT3Q9HA38 289 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 MTMR4Q9NYA4 1195 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 TFCP2L1Q9NZI6 479 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 GABBR1Q9UBS5 961 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 SETD5Q9C0A6 1442 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 HMGXB3Q12766 1538 aa5.02□□□□□ -1.61
SMCHD1-208ENST00000583344 CACNA1IQ9P0X4 2223 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 TMEM232C9JQI7 657 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 BTN3A1O00481 513 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 UBXN7O94888 489 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 FGBP02675 491 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 CT47B1P0C2W7 299 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 KITP10721 976 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 HOXD9P28356 352 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 GKP32189 559 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 LINC00205P59089 165 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 MEX3CQ5U5Q3 659 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 DAAM2Q86T65 1068 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 ADAMTS18Q8TE60 1221 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 PIGOQ8TEQ8 1089 aa5.01□□□□□ -1.61
SMCHD1-208ENST00000583344 KBTBD7Q8WVZ9 684 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms