RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 UNGP13051 313 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-203ENST00000580986 CHRNB2P17787 502 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 ATF6P18850 670 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 ADORA2BP29275 332 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 SCNN1AP37088 669 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 GRIK1P39086 918 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 EPHB3P54753 998 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 EPHA5P54756 1037 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 GSCP56915 257 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-203ENST00000580986 ARID5AQ03989 594 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 ITIH3Q06033 890 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 PDE4CQ08493 712 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 ASTE1Q2TB18 679 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-203ENST00000580986 TDRD12Q587J7 1177 aaKnown RBP10.98□□□□□ -0.65
CCDC47-203ENST00000580986 PPM1LQ5SGD2 360 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 DENND5BQ6ZUT9 1274 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 ZNF571Q7Z3V5 609 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-203ENST00000580986 TMEM110Q86TL2 294 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 RBM23Q86U06 439 aaKnown RBP10.98□□□□□ -0.65
CCDC47-203ENST00000580986 ZDHHC17Q8IUH5 632 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 TMTC1Q8IUR5 882 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 CCDC170Q8IYT3 715 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 NUP93Q8N1F7 819 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 TTC9BQ8N6N2 239 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 MSANTD4Q8NCY6 345 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 CCDC112Q8NEF3 446 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 VN1R2Q8NFZ6 395 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 SLC30A5Q8TAD4 765 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 OVCA2Q8WZ82 227 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 SEPT5Q99719 369 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-203ENST00000580986 LPIN3Q9BQK8 851 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 SLC4A5Q9BY07 1137 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 FBXO44Q9H4M3 255 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 UXTQ9UBK9 157 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-203ENST00000580986 USP3Q9Y6I4 520 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 MYO7AQ13402 2215 aa10.98□□□□□ -0.65
CCDC47-203ENST00000580986 SOBPA7XYQ1 873 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 SART1O43290 800 aaKnown RBP10.97□□□□□ -0.65
CCDC47-203ENST00000580986 XYLBO75191 536 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 BEST1O76090 585 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 FBXO21O94952 628 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 FGF19O95750 216 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 FOSL2P15408 326 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 IGFBP4P22692 258 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 GABRB2P47870 512 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 PPP3CCP48454 512 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 SLC5A3P53794 718 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 CACNA2D1P54289 1103 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 MAP3K7CLP57077 242 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 CCDC173Q0VFZ6 552 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 PDCLQ13371 301 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 SLC18A3Q16572 532 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 CLEC16AQ2KHT3 1053 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 ANKRD54Q6NXT1 300 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 DENND1BQ6P3S1 775 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 Q7L0L9 218 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 PIGZQ86VD9 579 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 PHF13Q86YI8 300 aaPredicted RBP10.97□□□□□ -0.65
CCDC47-203ENST00000580986 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 ELMOD1Q8N336 334 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 MICALL1Q8N3F8 863 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 WDTC1Q8N5D0 677 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 SPC24Q8NBT2 197 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 SLC20A1Q8WUM9 679 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 MYLIPQ8WY64 445 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 SECISBP2LQ93073 1101 aaKnown RBP10.97□□□□□ -0.65
CCDC47-203ENST00000580986 KCTD12Q96CX2 325 aaKnown RBP10.97□□□□□ -0.65
CCDC47-203ENST00000580986 VCPIP1Q96JH7 1222 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 MSLNLQ96KJ4 702 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 FAM161BQ96MY7 647 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 PPP1R9BQ96SB3 815 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 KCNK16Q96T55 309 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 PRKD2Q9BZL6 878 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 ISCUQ9H1K1 167 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 PDCL3Q9H2J4 239 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 CNGB3Q9NQW8 809 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 ZMYM5Q9UJ78 669 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 NENFQ9UMX5 172 aa10.97□□□□□ -0.65
CCDC47-203ENST00000580986 CLUHO75153 1309 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 DDX3XO00571 662 aaKnown RBP eCLIP10.96□□□□□ -0.651e-27■■■□□ 18.3
CCDC47-203ENST00000580986 CSPG5O95196 566 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 LCA5LO95447 670 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 CFHP08603 1231 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 TNFAIP3P21580 790 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 MMP8P22894 467 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 KIF11P52732 1056 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 TWF1Q12792 350 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 C10orf76Q5T2E6 689 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 SNX30Q5VWJ9 437 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 PM20D1Q6GTS8 502 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 PMF1Q6P1K2 205 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 BEND5Q7L4P6 421 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 CCDC186Q7Z3E2 898 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 TMEM139Q8IV31 216 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 SCN4BQ8IWT1 228 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 ZNF276Q8N554 614 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 C1orf131Q8NDD1 294 aaKnown RBP10.96□□□□□ -0.65
CCDC47-203ENST00000580986 PDZD8Q8NEN9 1154 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 IPO4Q8TEX9 1081 aaKnown RBP10.96□□□□□ -0.65
CCDC47-203ENST00000580986 IRGQQ8WZA9 623 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms