RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 EBF3Q9H4W6 596 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 PCDHGA2Q9Y5H1 932 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 COL4A2P08572 1712 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 C2orf78A6NCI8 922 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 ZNF840PA6NDX5 716 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 CXCL12P48061 93 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 SOX9P48436 509 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 SLC8A3P57103 927 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 TNK2Q07912 1038 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 INCA1Q0VD86 236 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 USP4Q13107 963 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 MTAPQ13126 283 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 PON2Q15165 354 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 ZNF77Q15935 545 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 C1orf220Q5T0J3 134 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 MAMSTRQ6ZN01 415 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 ADSSL1Q8N142 457 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 SLC2A14Q8TDB8 520 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 SECISBP2LQ93073 1101 aaKnown RBP21.34■■□□□ 1.01
SMG8-204ENST00000580498 CYP2S1Q96SQ9 504 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 HINFPQ9BQA5 517 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 SDCBP2Q9H190 292 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.34■■□□□ 1.01
SMG8-204ENST00000580498 RAB20Q9NX57 234 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 ZSCAN32Q9NX65 697 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 CHMP5Q9NZZ3 219 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 NME7Q9Y5B8 376 aa21.34■■□□□ 1.01
SMG8-204ENST00000580498 CACNA1IQ9P0X4 2223 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 ANAPC1Q9H1A4 1944 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 ATG13O75143 517 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 FGFR1OPO95684 399 aaKnown RBP21.33■■□□□ 1.01
SMG8-204ENST00000580498 MBL2P11226 248 aaPredicted RBP21.33■■□□□ 1.01
SMG8-204ENST00000580498 CHRNB1P11230 501 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 CD58P19256 250 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 SLC5A3P53794 718 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 USP46P62068 366 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 CCDC40Q4G0X9 1142 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 SPEM1Q8N4L4 309 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 EEF2KMTQ96G04 330 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 CEP63Q96MT8 703 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 PRMT8Q9NR22 394 aaPredicted RBP21.33■■□□□ 1.01
SMG8-204ENST00000580498 FAM49BQ9NUQ9 324 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 GCNT4Q9P109 453 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 R4GN57 208 aa21.33■■□□□ 1.01
SMG8-204ENST00000580498 CCDC130P13994 396 aa21.32■■□□□ 1
SMG8-204ENST00000580498 ADORA2BP29275 332 aa21.32■■□□□ 1
SMG8-204ENST00000580498 SLC7A9P82251 487 aa21.32■■□□□ 1
SMG8-204ENST00000580498 GOLGA8FQ08AF8 430 aa21.32■■□□□ 1
SMG8-204ENST00000580498 GOLGA8DPQ0D2H9 430 aa21.32■■□□□ 1
SMG8-204ENST00000580498 HECTD3Q5T447 861 aa21.32■■□□□ 1
SMG8-204ENST00000580498 ANKRD40Q6AI12 368 aa21.32■■□□□ 1
SMG8-204ENST00000580498 TRIM68Q6AZZ1 485 aa21.32■■□□□ 1
SMG8-204ENST00000580498 FUKQ8N0W3 1084 aa21.32■■□□□ 1
SMG8-204ENST00000580498 CYFIP2Q96F07 1278 aa21.32■■□□□ 1
SMG8-204ENST00000580498 TLR8Q9NR97 1041 aaKnown RBP21.32■■□□□ 1
SMG8-204ENST00000580498 COL4A3Q01955 1670 aa21.31■■□□□ 1
SMG8-204ENST00000580498 KIF26AQ9ULI4 1882 aaPredicted RBP21.31■■□□□ 1
SMG8-204ENST00000580498 DRD1P21728 446 aa21.31■■□□□ 1
SMG8-204ENST00000580498 TUBP50607 506 aa21.31■■□□□ 1
SMG8-204ENST00000580498 MAP3K7CLP57077 242 aa21.31■■□□□ 1
SMG8-204ENST00000580498 UBE2HP62256 183 aa21.31■■□□□ 1
SMG8-204ENST00000580498 FBXO43Q4G163 708 aa21.31■■□□□ 1
SMG8-204ENST00000580498 KLHL10Q6JEL2 608 aa21.31■■□□□ 1
SMG8-204ENST00000580498 ASCL5Q7RTU5 278 aa21.31■■□□□ 1
SMG8-204ENST00000580498 TADA2BQ86TJ2 420 aa21.31■■□□□ 1
SMG8-204ENST00000580498 ERCC4Q92889 916 aaPredicted RBP21.31■■□□□ 1
SMG8-204ENST00000580498 ELMO3Q96BJ8 720 aa21.31■■□□□ 1
SMG8-204ENST00000580498 SLC22A12Q96S37 553 aa21.31■■□□□ 1
SMG8-204ENST00000580498 KCNK16Q96T55 309 aa21.31■■□□□ 1
SMG8-204ENST00000580498 HNRNPABQ99729 332 aaKnown RBP21.31■■□□□ 1
SMG8-204ENST00000580498 ECT2Q9H8V3 914 aa21.31■■□□□ 1
SMG8-204ENST00000580498 PNPLA8Q9NP80 782 aa21.31■■□□□ 1
SMG8-204ENST00000580498 TBC1D14Q9P2M4 693 aa21.31■■□□□ 1
SMG8-204ENST00000580498 MAN1B1Q9UKM7 699 aa21.31■■□□□ 1
SMG8-204ENST00000580498 RAB23Q9ULC3 237 aa21.31■■□□□ 1
SMG8-204ENST00000580498 CPQQ9Y646 472 aa21.31■■□□□ 1
SMG8-204ENST00000580498 HELZP42694 1942 aaKnown RBP21.31■■□□□ 1
SMG8-204ENST00000580498 LEFTY2O00292 366 aa21.3■■□□□ 1
SMG8-204ENST00000580498 CILPO75339 1184 aa21.3■■□□□ 1
SMG8-204ENST00000580498 GNA14O95837 355 aa21.3■■□□□ 1
SMG8-204ENST00000580498 ARSAP15289 507 aa21.3■■□□□ 1
SMG8-204ENST00000580498 CACNA2D1P54289 1103 aa21.3■■□□□ 1
SMG8-204ENST00000580498 ORC1Q13415 861 aa21.3■■□□□ 1
SMG8-204ENST00000580498 FZD5Q13467 585 aa21.3■■□□□ 1
SMG8-204ENST00000580498 ISM2Q6H9L7 571 aa21.3■■□□□ 1
SMG8-204ENST00000580498 HEXIM2Q96MH2 286 aaKnown RBP21.3■■□□□ 1
SMG8-204ENST00000580498 P2RY13Q9BPV8 354 aa21.3■■□□□ 1
SMG8-204ENST00000580498 APOBEC3GQ9HC16 384 aaKnown RBP21.3■■□□□ 1
SMG8-204ENST00000580498 CSNK1G1Q9HCP0 422 aa21.3■■□□□ 1
SMG8-204ENST00000580498 HPS4Q9NQG7 708 aa21.3■■□□□ 1
SMG8-204ENST00000580498 SH3BP1Q9Y3L3 701 aa21.3■■□□□ 1
SMG8-204ENST00000580498 WNT6Q9Y6F9 365 aa21.3■■□□□ 1
SMG8-204ENST00000580498 SHISA7A6NL88 538 aa21.29■■□□□ 1
SMG8-204ENST00000580498 TRDMT1O14717 391 aaKnown RBP21.29■■□□□ 1
SMG8-204ENST00000580498 OAS1P00973 400 aaKnown RBP21.29■■□□□ 1
SMG8-204ENST00000580498 TBXAS1P24557 533 aaPredicted RBP21.29■■□□□ 1
SMG8-204ENST00000580498 MCCD1P59942 119 aaPredicted RBP21.29■■□□□ 1
SMG8-204ENST00000580498 FOXR2Q6PJQ5 311 aa21.29■■□□□ 1
SMG8-204ENST00000580498 TXNDC11Q6PKC3 985 aa21.29■■□□□ 1
SMG8-204ENST00000580498 FILIP1Q7Z7B0 1213 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms