RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 ADAM15Q13444 863 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 DDR2Q16832 855 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 HGSNATQ68CP4 663 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ANKRD54Q6NXT1 300 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 DENND1BQ6P3S1 775 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PIGZQ86VD9 579 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TTC30AQ86WT1 665 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ERICH1Q86X53 443 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CCDC170Q8IYT3 715 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PDZD8Q8NEN9 1154 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 KCTD13Q8WZ19 329 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 DDX1Q92499 740 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GOLGA1Q92805 767 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TRIM11Q96F44 468 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 NECAB3Q96P71 396 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SMOQ99835 787 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 BAG1Q99933 345 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 RHOBTB2Q9BYZ6 727 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PRKD2Q9BZL6 878 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ASAH2Q9NR71 780 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 STRIP2Q9ULQ0 834 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 BRWD1Q9NSI6 2320 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CCDC195A0A1B0GUA6 201 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SLC38A8A6NNN8 435 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CCL16O15467 120 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 FBXO21O94952 628 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CALCAP01258 141 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CYP1A1P04798 512 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CALB1P05937 261 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GZMAP12544 262 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PTPN2P17706 415 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ATF6P18850 670 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 FECHP22830 423 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SSTR3P32745 418 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CDH5P33151 784 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GPD2P43304 727 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PPP3CCP48454 512 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 NOMO3P69849 1222 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ITIH3Q06033 890 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GOLGA8FQ08AF8 430 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GOLGA8DPQ0D2H9 430 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PDCLQ13371 301 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MAPK8IP2Q13387 824 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 KCNC3Q14003 757 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CLEC16AQ2KHT3 1053 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PABPC1LQ4VXU2 614 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PKDCCQ504Y2 493 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CYP4A22Q5TCH4 519 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 E4F1Q66K89 784 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CCDC186Q7Z3E2 898 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ZNF571Q7Z3V5 609 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ZDHHC17Q8IUH5 632 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ARHGAP18Q8N392 663 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TXLNBQ8N3L3 684 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 C1orf131Q8NDD1 294 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GIPC2Q8TF65 315 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SLC35F5Q8WV83 523 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PSMG2Q969U7 264 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PPP1R13BQ96KQ4 1090 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 RIPOR3Q96MK2 946 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SLITRK1Q96PX8 696 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PPP1R9BQ96SB3 815 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 KCNK16Q96T55 309 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ZSWIM1Q9BR11 485 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TRIM62Q9BVG3 475 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CRISPLD1Q9H336 500 aa11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 NHEJ1Q9H9Q4 299 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MAGED2Q9UNF1 606 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ZNF197O14709 1029 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GPR37L1O60883 481 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 RTN2O75298 545 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 RFPL2O75678 378 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SOAT2O75908 522 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 BEST1O76090 585 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CHRNB2P17787 502 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 YWHAQP27348 245 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CDC25CP30307 473 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GTF2F1P35269 517 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 EIF4A3P38919 411 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GPR15P49685 360 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PSEN1P49768 467 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 RGS7P49802 495 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CDR1P51861 262 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SLC5A3P53794 718 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CENPCQ03188 943 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TFF2Q03403 129 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 IFRD2Q12894 506 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SLC18A3Q16572 532 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 RARS2Q5T160 578 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 C10orf76Q5T2E6 689 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 NAA35Q5VZE5 725 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ACAD10Q6JQN1 1059 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 WDR59Q6PJI9 974 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TOGARAM2Q6ZUX3 1019 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PDZD4Q76G19 769 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TTC9BQ8N6N2 239 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 VN1R2Q8NFZ6 395 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 OVCA2Q8WZ82 227 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SMG7Q92540 1137 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms