RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ZDHHC18Q9NUE0 388 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 FAM49BQ9NUQ9 324 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 RRN3Q9NYV6 651 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 STAP1Q9ULZ2 295 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 ATP8A1Q9Y2Q0 1164 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 CITO14578 2027 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 TCRBV7S2A1N4TA0A589 114 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 CFAP69A5D8W1 941 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 ARL5CA6NH57 179 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 PI4K2BG5E9Z4 385 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 PTGESO14684 152 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 GABRDO14764 452 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 MCF2LO15068 1137 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 LIASO43766 372 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 PFKMP08237 780 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 FAM200BP0CF97 657 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 GHRP10912 638 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 ATP5DP30049 168 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 ECHS1P30084 290 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 CD52P31358 61 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 STIP1P31948 543 aaKnown RBP11.65□□□□□ -0.54
SKA2-204ENST00000578519 MLH1P40692 756 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 RPL21P46778 160 aaKnown RBP11.65□□□□□ -0.54
SKA2-204ENST00000578519 KCNJ1P48048 391 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 RGS7P49802 495 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 VCPP55072 806 aaKnown RBP11.65□□□□□ -0.54
SKA2-204ENST00000578519 OGDHQ02218 1023 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 SLC25A11Q02978 314 aaKnown RBP11.65□□□□□ -0.54
SKA2-204ENST00000578519 ADCY2Q08462 1091 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 ZNF252P-AS1Q0IIN9 211 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 TRIM32Q13049 653 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 TUSC3Q13454 348 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 BFSP2Q13515 415 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 DSC3Q14574 896 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 CEP85LQ5SZL2 805 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 C6orf118Q5T5N4 469 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 PMF1Q6P1K2 205 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 DCLRE1AQ6PJP8 1040 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 GLB1LQ6UWU2 654 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 LEKR1Q6ZMV7 388 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 ZNF771Q7L3S4 317 aaPredicted RBP11.65□□□□□ -0.54
SKA2-204ENST00000578519 STRADAQ7RTN6 431 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 TTC30AQ86WT1 665 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 PSTKQ8IV42 348 aaKnown RBP11.65□□□□□ -0.54
SKA2-204ENST00000578519 SIX6OS1Q8N1H7 587 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 KBTBD7Q8WVZ9 684 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 RSAD2Q8WXG1 361 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 ADAM2Q99965 735 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 ROPN1BQ9BZX4 212 aaPredicted RBP11.65□□□□□ -0.54
SKA2-204ENST00000578519 ROPN1Q9HAT0 212 aaPredicted RBP11.65□□□□□ -0.54
SKA2-204ENST00000578519 STARD7Q9NQZ5 370 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 CHST7Q9NS84 486 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 SAGE1Q9NXZ1 904 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 DDX43Q9NXZ2 648 aaKnown RBP11.65□□□□□ -0.54
SKA2-204ENST00000578519 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.65□□□□□ -0.54
SKA2-204ENST00000578519 PCSK1NQ9UHG2 260 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 MGAMO43451 1857 aa11.65□□□□□ -0.54
SKA2-204ENST00000578519 APOC4-APOC2K7ER74 178 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 AGPSO00116 658 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 MDM4O15151 490 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 SPTLC1O15269 473 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 TRAPPC3O43617 180 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 CST8O60676 142 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 APOC2P02655 101 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 IVLP07476 585 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 NUDT17P0C025 328 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 NPR3P17342 541 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 GRK4P32298 578 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 CDH6P55285 790 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 LPIN1Q14693 890 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 TAZQ16635 292 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 SCYL2Q6P3W7 929 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 OLFML1Q6UWY5 402 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 AGMOQ6ZNB7 445 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 EMC1Q8N766 993 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 RNF169Q8NCN4 708 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 FBXO25Q8TCJ0 367 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 SLC2A14Q8TDB8 520 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 RAPGEF5Q92565 580 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 HSPH1Q92598 858 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 ATP6V1G3Q96LB4 118 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 SYT15Q9BQS2 421 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 DDX23Q9BUQ8 820 aaKnown RBP11.64□□□□□ -0.55
SKA2-204ENST00000578519 CALN1Q9BXU9 219 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 FAM204AQ9H8W3 233 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 GRHL1Q9NZI5 618 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 CASP8AP2Q9UKL3 1982 aa11.64□□□□□ -0.55
SKA2-204ENST00000578519 SGK1O00141 431 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 ARVCFO00192 962 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 INPPL1O15357 1258 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 PARNO95453 639 aaKnown RBP11.63□□□□□ -0.55
SKA2-204ENST00000578519 FGFR1P11362 822 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 KRT10P13645 584 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 LCP1P13796 627 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 TYMPP19971 482 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 TGM2P21980 687 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 LMO2P25791 158 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 NOS2P35228 1153 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 SCNN1GP51170 649 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 ZNF135P52742 658 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms