RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 EBF3Q9H4W6 596 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 CSNK1G1Q9HCP0 422 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 PRMT8Q9NR22 394 aaPredicted RBP24.37■■□□□ 1.49
VAPA-205ENST00000578314 COMMD8Q9NX08 183 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 RAB20Q9NX57 234 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 R4GN57 208 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 FAM186AA6NE01 2351 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 PATJQ8NI35 1801 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 PTPRDP23468 1912 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 TICRRQ7Z2Z1 1910 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 TRIM49BA6NDI0 452 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 OTOL1A6NHN0 477 aaPredicted RBP24.36■■□□□ 1.49
VAPA-205ENST00000578314 PSMA7O14818 248 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 AP1G2O75843 785 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 OLFM2O95897 454 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 SLC7A9P82251 487 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 CSTF1Q05048 431 aaKnown RBP24.36■■□□□ 1.49
VAPA-205ENST00000578314 STIM1Q13586 685 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 LRRC32Q14392 662 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 WDR44Q5JSH3 913 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 DGKKQ5KSL6 1271 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 ISM2Q6H9L7 571 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 C12orf29Q8N999 325 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 ZMIZ2Q8NF64 920 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 SH3RF2Q8TEC5 729 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 WHAMMQ8TF30 809 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 OSCP1Q8WVF1 389 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 HNRNPABQ99729 332 aaKnown RBP24.36■■□□□ 1.49
VAPA-205ENST00000578314 SMOQ99835 787 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 NT5C1AQ9BXI3 368 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 RNF38Q9H0F5 515 aa24.36■■□□□ 1.49
VAPA-205ENST00000578314 PTPRZ1P23471 2315 aaPredicted RBP24.36■■□□□ 1.49
VAPA-205ENST00000578314 DENND4CQ5VZ89 1909 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 FAM92AA1XBS5 289 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 CILPO75339 1184 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 OAS1P00973 400 aaKnown RBP24.35■■□□□ 1.49
VAPA-205ENST00000578314 CCDC130P13994 396 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 CD44P16070 742 aaKnown RBP24.35■■□□□ 1.49
VAPA-205ENST00000578314 TRIM21P19474 475 aaKnown RBP24.35■■□□□ 1.49
VAPA-205ENST00000578314 BMP6P22004 513 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 ZXDBP98169 803 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 ZC3H14Q6PJT7 736 aaKnown RBP24.35■■□□□ 1.49
VAPA-205ENST00000578314 KIAA1958Q8N8K9 716 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 PDZD8Q8NEN9 1154 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 SCAMP5Q8TAC9 235 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 NELL1Q92832 810 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 KRT82Q9NSB4 513 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 DUS2Q9NX74 493 aaKnown RBP24.35■■□□□ 1.49
VAPA-205ENST00000578314 COQ4Q9Y3A0 265 aa24.35■■□□□ 1.49
VAPA-205ENST00000578314 BEST1O76090 585 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 ARSAP15289 507 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 SLC5A3P53794 718 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 MORC3Q14149 939 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 PON2Q15165 354 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 SNX30Q5VWJ9 437 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 FOXR2Q6PJQ5 311 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 FBXO32Q969P5 355 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 CHFRQ96EP1 664 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 FAM124BQ9H5Z6 455 aaPredicted RBP24.34■■□□□ 1.49
VAPA-205ENST00000578314 FAM49BQ9NUQ9 324 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 CHMP5Q9NZZ3 219 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 ARMCX3Q9UH62 379 aaPredicted RBP24.34■■□□□ 1.49
VAPA-205ENST00000578314 FANCMQ8IYD8 2048 aa24.34■■□□□ 1.49
VAPA-205ENST00000578314 OBSL1O75147 1896 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 PPP1R3GB7ZBB8 358 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 LMNAP02545 664 aaKnown RBP24.33■■□□□ 1.49
VAPA-205ENST00000578314 CD58P19256 250 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 AMPD2Q01433 879 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 IFRD2Q12894 506 aaPredicted RBP24.33■■□□□ 1.49
VAPA-205ENST00000578314 CCINQ13939 588 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 GAS6Q14393 721 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 CBWD6Q4V339 395 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 CBWD3Q5JTY5 395 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 CBWD5Q5RIA9 395 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 TCERG1LQ5VWI1 586 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 FILIP1Q7Z7B0 1213 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 SYNPOQ8N3V7 929 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 SPEM1Q8N4L4 309 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 TTC39CQ8N584 583 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 SLC35C1Q96A29 364 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 CYFIP2Q96F07 1278 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 CEP63Q96MT8 703 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 ECT2Q9H8V3 914 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 METTL14Q9HCE5 456 aaKnown RBP24.33■■□□□ 1.49
VAPA-205ENST00000578314 RBM12Q9NTZ6 932 aaKnown RBP24.33■■□□□ 1.49
VAPA-205ENST00000578314 CHORDC1Q9UHD1 332 aaPredicted RBP24.33■■□□□ 1.49
VAPA-205ENST00000578314 GREB1Q4ZG55 1949 aa24.33■■□□□ 1.49
VAPA-205ENST00000578314 ZNF292O60281 2723 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 LEFTY2O00292 366 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 TRDMT1O14717 391 aaKnown RBP24.32■■□□□ 1.48
VAPA-205ENST00000578314 ABL1P00519 1130 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 ZDHHC11BP0C7U3 371 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 CCR3P51677 355 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 MAP3K7CLP57077 242 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 EML3Q32P44 896 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 DCAF17Q5H9S7 520 aaPredicted RBP24.32■■□□□ 1.48
VAPA-205ENST00000578314 ATP2A3Q93084 1043 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 DUSP9Q99956 384 aaKnown RBP24.32■■□□□ 1.48
VAPA-205ENST00000578314 FAM126AQ9BYI3 521 aaPredicted RBP24.32■■□□□ 1.48
VAPA-205ENST00000578314 DNAI2Q9GZS0 605 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms