RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 TRMT1Q9NXH9 659 aaKnown RBP5.3□□□□□ -1.56
IFT20-205ENST00000578009 TMOD4Q9NZQ9 345 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 CGNQ9P2M7 1197 aaKnown RBP5.3□□□□□ -1.56
IFT20-205ENST00000578009 SIK3Q9Y2K2 1263 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 DAAM1Q9Y4D1 1078 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 AFG3L2Q9Y4W6 797 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 EPN1Q9Y6I3 576 aaPredicted RBP5.3□□□□□ -1.56
IFT20-205ENST00000578009 MYH7BA7E2Y1 1941 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 ASTN2O75129 1339 aaPredicted RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 GTPBP10A4D1E9 387 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 UNCXA6NJT0 531 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 RASSF10A6NK89 507 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 B4DLN1 442 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 EIF3CLB5ME19 914 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 TRAF5O00463 557 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 SLC16A3O15427 465 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 CALUO43852 315 aaPredicted RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 TBCAO75347 108 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 ARP10275 920 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 ALAS1P13196 640 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 TRIM21P19474 475 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 SCP2P22307 547 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 CYLC1P35663 651 aaPredicted RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 QARSP47897 775 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 RPS6P62753 249 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 KRT83P78385 493 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 MRPS9P82933 396 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 DPTQ07507 201 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 PABPC4Q13310 644 aaKnown RBP eCLIP5.29□□□□□ -1.56
IFT20-205ENST00000578009 SF1Q15637 639 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 SV2CQ496J9 727 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 ACBD5Q5T8D3 534 aaPredicted RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 RAD9BQ6WBX8 426 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 ZNF575Q86XF7 245 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 PROSER1Q86XN7 944 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 TRIM48Q8IWZ4 208 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 C4orf19Q8IY42 314 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 FAM169BQ8N8A8 192 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 DTX3Q8N9I9 347 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 KREMEN2Q8NCW0 462 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 SLC17A8Q8NDX2 589 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.29□□□□□ -1.563e-8■■■□□ 15.3
IFT20-205ENST00000578009 NSUN6Q8TEA1 469 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 HPS3Q969F9 1004 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 GJA10Q969M2 543 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 ERO1AQ96HE7 468 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 AJUBAQ96IF1 538 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 DYDC2Q96IM9 177 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 CDHR1Q96JP9 859 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 INPP4AQ96PE3 977 aaPredicted RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 IWS1Q96ST2 819 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 RMDN3Q96TC7 470 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 EIF3CQ99613 913 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 REEP2Q9BRK0 252 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 PDCD2LQ9BRP1 358 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 STRA6Q9BX79 667 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 TEX13BQ9BXU2 312 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 BHMT2Q9H2M3 363 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 UNC45AQ9H3U1 944 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 ST6GALNAC4Q9H4F1 302 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 HAUS4Q9H6D7 363 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 PARVGQ9HBI0 331 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 RAVER2Q9HCJ3 691 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 AGO4Q9HCK5 861 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 ANKEF1Q9NU02 776 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 TYW1Q9NV66 732 aaKnown RBP5.29□□□□□ -1.56
IFT20-205ENST00000578009 GGA3Q9NZ52 723 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 RGL1Q9NZL6 768 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 COL20A1Q9P218 1284 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 ASH2LQ9UBL3 628 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 ZFP69BQ9UJL9 534 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 MYO6Q9UM54 1294 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 ZHX2Q9Y6X8 837 aa5.29□□□□□ -1.56
IFT20-205ENST00000578009 NFASCO94856 1347 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 ARHGEF35A5YM69 484 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 KRIT1O00522 736 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 PES1O00541 588 aaKnown RBP5.28□□□□□ -1.56
IFT20-205ENST00000578009 CXCL11O14625 94 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 MAPK13O15264 365 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 KIF5CO60282 957 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 NDUFA10O95299 355 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 IPO7O95373 1038 aaKnown RBP5.28□□□□□ -1.56
IFT20-205ENST00000578009 SLU7O95391 586 aaKnown RBP5.28□□□□□ -1.56
IFT20-205ENST00000578009 LCA5LO95447 670 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 CPP00450 1065 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 KNG1P01042 644 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 CKMP06732 381 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 ITGAVP06756 1048 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 ANXA13P27216 316 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 CCND2P30279 289 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 CASQ1P31415 396 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 ABCD1P33897 745 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 HOXD13P35453 343 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 COPB2P35606 906 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 EPS15P42566 896 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 GNG11P61952 73 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 PSMC5P62195 406 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 PURAQ00577 322 aaKnown RBP5.28□□□□□ -1.56
IFT20-205ENST00000578009 GOLGA8FQ08AF8 430 aa5.28□□□□□ -1.56
IFT20-205ENST00000578009 GOLGA8DPQ0D2H9 430 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms