RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 NCOA4Q13772 614 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 CEP135Q66GS9 1140 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 SCARA5Q6ZMJ2 495 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 SLC9A9Q8IVB4 645 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 MED10Q9BTT4 135 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 B3GNT5Q9BYG0 378 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 KCTD10Q9H3F6 313 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 CDV3Q9UKY7 258 aaKnown RBP15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 ATP8B3O60423 1300 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 THADAQ6YHU6 1953 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 PDXKO00764 312 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 LRP3O75074 770 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 NR3C1P04150 777 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 RPN1P04843 607 aaKnown RBP15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 SYKP43405 635 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 RAP1GAPP47736 663 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 DLG4P78352 724 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 CLDN10P78369 228 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 ZXDBP98169 803 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 NUP93Q8N1F7 819 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 RPLP0P6Q8NHW5 317 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 CCDC47Q96A33 483 aaKnown RBP15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 ELMO3Q96BJ8 720 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 CHAMP1Q96JM3 812 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 TNIP3Q96KP6 325 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 RNF38Q9H0F5 515 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 TMEM30AQ9NV96 361 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 HPSEQ9Y251 543 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 FRMD4BQ9Y2L6 1034 aa15.88■□□□□ 0.13
RN7SL560P-201ENST00000577943 NUP205Q92621 2012 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 CACNA1AO00555 2505 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 CCDC163A0A0D9SF12 145 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 MED19A0JLT2 244 aaPredicted RBP15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 CALUO43852 315 aaPredicted RBP15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 RTN3O95197 1032 aaPredicted RBP15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 KIF20AO95235 890 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 VNN1O95497 513 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 OAS1P00973 400 aaKnown RBP15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 CCDC192P0DO97 292 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 MBL2P11226 248 aaPredicted RBP15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 P4HA1P13674 534 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 YWHAQP27348 245 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 ATXN1P54253 815 aaKnown RBP15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 SLC7A9P82251 487 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 SGSM1Q2NKQ1 1148 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 FAM35AQ86V20 835 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 ABCA7Q8IZY2 2146 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 FAM160A2Q8N612 972 aaPredicted RBP15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 TMC2Q8TDI7 906 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 TMEM174Q8WUU8 243 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 FBXO32Q969P5 355 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 KCNK16Q96T55 309 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 POLR3BQ9NW08 1133 aaPredicted RBP15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 SMPD4Q9NXE4 827 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 CPQQ9Y646 472 aa15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.87■□□□□ 0.13
RN7SL560P-201ENST00000577943 RPP40O75818 363 aaKnown RBP15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 OLFM2O95897 454 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 NDUFA8P51970 172 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 ZACNQ401N2 412 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 FILIP1Q7Z7B0 1213 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 ACOT1Q86TX2 421 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 CAMKK1Q8N5S9 505 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 PDZD8Q8NEN9 1154 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 CCDC26Q8TAB7 109 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 GAB3Q8WWW8 586 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 ACDQ96AP0 544 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 SMARCD1Q96GM5 515 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 HHIPQ96QV1 700 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 SDCBP2Q9H190 292 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 SEMA4GQ9NTN9 838 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 ZDHHC9Q9Y397 364 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 SPTBN2O15020 2390 aa15.86■□□□□ 0.13
RN7SL560P-201ENST00000577943 SLC9A3R1O14745 358 aaPredicted RBP15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 IKBKBO14920 756 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 AP1G2O75843 785 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 PRR29P0C7W0 189 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 PIK3CAP42336 1068 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 SLC5A3P53794 718 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 CSRP2Q16527 193 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 PRR23CQ6ZRP0 262 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 PAQR9Q6ZVX9 377 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 SV2AQ7L0J3 742 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 SYT13Q7L8C5 426 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 CACNA2D4Q7Z3S7 1137 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 DDX42Q86XP3 938 aaKnown RBP eCLIP15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 KIAA1958Q8N8K9 716 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 OVCA2Q8WZ82 227 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 EZH1Q92800 747 aaPredicted RBP15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 RTKNQ9BST9 563 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 DMAP1Q9NPF5 467 aaPredicted RBP15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 CFAP97Q9P2B7 532 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 CHORDC1Q9UHD1 332 aaPredicted RBP15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 TRAF3IP3Q9Y228 551 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 ATP6V1DQ9Y5K8 247 aa15.85■□□□□ 0.13
RN7SL560P-201ENST00000577943 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.84■□□□□ 0.13
RN7SL560P-201ENST00000577943 SCAMP3O14828 347 aaKnown RBP15.84■□□□□ 0.13
RN7SL560P-201ENST00000577943 AXIN1O15169 862 aa15.84■□□□□ 0.13
RN7SL560P-201ENST00000577943 RHOBTB3O94955 611 aa15.84■□□□□ 0.13
RN7SL560P-201ENST00000577943 TRIM21P19474 475 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms