RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SOWAHAQ2M3V2 549 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 L1TD1Q5T7N2 865 aaKnown RBP14.26□□□□□ -0.13
COPS3-214ENST00000577246 OSTM1Q86WC4 334 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 SFR1Q86XK3 245 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 PROSER1Q86XN7 944 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 SYCP3Q8IZU3 236 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 MYLPFQ96A32 169 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 SAAL1Q96ER3 474 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 SLITRK1Q96PX8 696 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 MBD1Q9UIS9 605 aaPredicted RBP14.26□□□□□ -0.13
COPS3-214ENST00000577246 PCDHB13Q9Y5F0 798 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 IGF2RP11717 2491 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 SCN1AP35498 2009 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 DENND4CQ5VZ89 1909 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 OBSL1O75147 1896 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 KIAA0391O15091 583 aaKnown RBP14.25□□□□□ -0.13
COPS3-214ENST00000577246 ZNF217O75362 1048 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 PPP1R37O75864 691 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 OLFM2O95897 454 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 ABL1P00519 1130 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 TNNC2P02585 160 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 HNRNPLP14866 589 aaKnown RBP eCLIP14.25□□□□□ -0.13
COPS3-214ENST00000577246 BDNFP23560 247 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 PSMC1P62191 440 aaKnown RBP14.25□□□□□ -0.13
COPS3-214ENST00000577246 ZXDBP98169 803 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 GAD2Q05329 585 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 TDRD10Q5VZ19 366 aaKnown RBP14.25□□□□□ -0.13
COPS3-214ENST00000577246 MINDY1Q8N5J2 469 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 PDZD8Q8NEN9 1154 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 C8orf48Q96LL4 319 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 MTMR12Q9C0I1 747 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 SMPD4Q9NXE4 827 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 CFAP97Q9P2B7 532 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 STK17AQ9UEE5 414 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 CCDC39Q9UFE4 941 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 KIAA1549LQ6ZVL6 1849 aa14.25□□□□□ -0.13
COPS3-214ENST00000577246 NUP205Q92621 2012 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 ZNF638Q14966 1978 aaKnown RBP14.24□□□□□ -0.13
COPS3-214ENST00000577246 A0A1W2PQD8 194 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 E2F8A0AVK6 867 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 TBC1D3BA6NDS4 549 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 TAF4O00268 1085 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 ARHGAP33O14559 1287 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 ADAM23O75077 832 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 GCNT3O95395 438 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 OAS1P00973 400 aaKnown RBP14.24□□□□□ -0.13
COPS3-214ENST00000577246 SLC6A11P48066 632 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 KDSRQ06136 332 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 ZNF33AQ06730 810 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 SURF1Q15526 300 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 CCDC142Q17RM4 750 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 SDE2Q6IQ49 451 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 RHBDF2Q6PJF5 856 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 DYMQ7RTS9 669 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 RAB44Q7Z6P3 723 aaPredicted RBP14.24□□□□□ -0.13
COPS3-214ENST00000577246 CHCHD4Q8N4Q1 142 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 ZNF513Q8N8E2 541 aaPredicted RBP14.24□□□□□ -0.13
COPS3-214ENST00000577246 CXorf38Q8TB03 319 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 MYCBPAPQ8TBZ2 947 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 NOC3LQ8WTT2 800 aaKnown RBP14.24□□□□□ -0.13
COPS3-214ENST00000577246 HPDLQ96IR7 371 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 STRA6Q9BX79 667 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 FAM124BQ9H5Z6 455 aaPredicted RBP14.24□□□□□ -0.13
COPS3-214ENST00000577246 CAPN10Q9HC96 672 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 OLFML3Q9NRN5 406 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 DNAAF2Q9NVR5 837 aaKnown RBP14.24□□□□□ -0.13
COPS3-214ENST00000577246 DEC1Q9P2X7 70 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 SUSD2Q9UGT4 822 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 SIX4Q9UIU6 781 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 PCDHB9Q9Y5E1 797 aa14.24□□□□□ -0.13
COPS3-214ENST00000577246 TCHHQ07283 1943 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 ATP2C2O75185 946 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 SEC24BO95487 1268 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 NEFLP07196 543 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 MBL2P11226 248 aaPredicted RBP14.23□□□□□ -0.13
COPS3-214ENST00000577246 WARSP23381 471 aaKnown RBP14.23□□□□□ -0.13
COPS3-214ENST00000577246 TXLNAP40222 546 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 WNT7BP56706 349 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 USP46P62068 366 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 DUOXA2Q1HG44 320 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 SYCP2LQ5T4T6 812 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 EMC10Q5UCC4 262 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 LIMS2Q7Z4I7 341 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 C12orf40Q86WS4 652 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 FRMD1Q8N878 549 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 KBTBD7Q8WVZ9 684 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 OVCA2Q8WZ82 227 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 PCED1BQ96HM7 432 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 MMS19Q96T76 1030 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 ELOVL4Q9GZR5 314 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 RNF38Q9H0F5 515 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 IKZF4Q9H2S9 585 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 SNX25Q9H3E2 840 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 PDE11AQ9HCR9 933 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 CRTAC1Q9NQ79 661 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 CALCOCO1Q9P1Z2 691 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 THADAQ6YHU6 1953 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 ANK1P16157 1881 aa14.23□□□□□ -0.13
COPS3-214ENST00000577246 ATG2BQ96BY7 2078 aa14.22□□□□□ -0.13
COPS3-214ENST00000577246 WDFY3Q8IZQ1 3526 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms