RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 SLC4A5Q9BY07 1137 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 KLK14Q9P0G3 267 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 C2CD4BA6NLJ0 364 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 HUS1O60921 280 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 TRUB2O95900 331 aaKnown RBP19.61■□□□□ 0.73
SPNS3-204ENST00000575194 COL6A1P12109 1028 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 PDGFRAP16234 1089 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 KLRC2P26717 231 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 MIPP30301 263 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 RDXP35241 583 aaKnown RBP19.61■□□□□ 0.73
SPNS3-204ENST00000575194 BST2Q10589 180 aaKnown RBP19.61■□□□□ 0.73
SPNS3-204ENST00000575194 TRIP13Q15645 432 aaPredicted RBP19.61■□□□□ 0.73
SPNS3-204ENST00000575194 ZSCAN26Q16670 478 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 DNAJC21Q5F1R6 531 aaKnown RBP19.61■□□□□ 0.73
SPNS3-204ENST00000575194 IZUMO3Q5VZ72 239 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 BBS12Q6ZW61 710 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 CRYBG2Q8N1P7 616 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 ARFGAP1Q8N6T3 406 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 KCTD6Q8NC69 237 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 SMG8Q8ND04 991 aaKnown RBP19.61■□□□□ 0.73
SPNS3-204ENST00000575194 TNIP3Q96KP6 325 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 TMEM106CQ9BVX2 250 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 SEZ6LQ9BYH1 1024 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 FAM49BQ9NUQ9 324 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 SLC38A7Q9NVC3 462 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 DNPEPQ9ULA0 475 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 USP18Q9UMW8 372 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 CDY2AQ9Y6F7 541 aa19.61■□□□□ 0.73
SPNS3-204ENST00000575194 ARVCFO00192 962 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 FAM163BP0C2L3 166 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 IL1R2P27930 398 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 GNL1P36915 607 aaPredicted RBP19.6■□□□□ 0.73
SPNS3-204ENST00000575194 SCNN1AP37088 669 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 SLC6A3Q01959 620 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 SMTNL2Q2TAL5 461 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 C6orf118Q5T5N4 469 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 TMEM110Q86TL2 294 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 SERINC5Q86VE9 423 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 TTC30AQ86WT1 665 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 TOP6BLQ8N6T0 577 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 CMASQ8NFW8 434 aaPredicted RBP19.6■□□□□ 0.73
SPNS3-204ENST00000575194 RXFP2Q8WXD0 754 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 ACSF2Q96CM8 615 aaPredicted RBP19.6■□□□□ 0.73
SPNS3-204ENST00000575194 FAM118BQ9BPY3 351 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 SEMA4AQ9H3S1 761 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 RSAD1Q9HA92 442 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 CHST12Q9NRB3 414 aa19.6■□□□□ 0.73
SPNS3-204ENST00000575194 BCCIPQ9P287 314 aaKnown RBP eCLIP19.6■□□□□ 0.73
SPNS3-204ENST00000575194 EIF3HO15372 352 aaKnown RBP eCLIP19.59■□□□□ 0.73
SPNS3-204ENST00000575194 PRPSAP2O60256 369 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 LRPAP1P30533 357 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 IRAK1P51617 712 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 SLC29A2Q14542 456 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 OASLQ15646 514 aaKnown RBP19.59■□□□□ 0.73
SPNS3-204ENST00000575194 OLFML1Q6UWY5 402 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 LIMS2Q7Z4I7 341 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 SLC35F5Q8WV83 523 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 KBTBD7Q8WVZ9 684 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 PGM2Q96G03 612 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 CALCOCO1Q9P1Z2 691 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 WARSP23381 471 aaKnown RBP19.59■□□□□ 0.73
SPNS3-204ENST00000575194 ACADSBP45954 432 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 VPS41P49754 854 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 RGS7P49802 495 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 PTGISQ16647 500 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 RPAINQ86UA6 219 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 RFX6Q8HWS3 928 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 ADGRF2Q8IZF7 708 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 ANKRD52Q8NB46 1076 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 SLC35B2Q8TB61 432 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 ROPN1BQ9BZX4 212 aaPredicted RBP19.59■□□□□ 0.73
SPNS3-204ENST00000575194 SENP6Q9GZR1 1112 aaPredicted RBP19.59■□□□□ 0.73
SPNS3-204ENST00000575194 ROPN1Q9HAT0 212 aaPredicted RBP19.59■□□□□ 0.73
SPNS3-204ENST00000575194 PCDH9Q9HC56 1237 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 TRMT13Q9NUP7 481 aaKnown RBP19.59■□□□□ 0.73
SPNS3-204ENST00000575194 PCSK1NQ9UHG2 260 aa19.59■□□□□ 0.73
SPNS3-204ENST00000575194 DNALI1O14645 258 aaPredicted RBP19.58■□□□□ 0.72
SPNS3-204ENST00000575194 TP73O15350 636 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 SDC4P31431 198 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 HPDP32754 393 aaPredicted RBP19.58■□□□□ 0.72
SPNS3-204ENST00000575194 ATP1A2P50993 1020 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 TFDP2Q14188 446 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 P3H1Q32P28 736 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 HIBCHQ6NVY1 386 aaPredicted RBP19.58■□□□□ 0.72
SPNS3-204ENST00000575194 PMF1Q6P1K2 205 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 LRRC31Q6UY01 552 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 RELL1Q8IUW5 271 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 MAP7D3Q8IWC1 876 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 DIS3LQ8TF46 1054 aaKnown RBP19.58■□□□□ 0.72
SPNS3-204ENST00000575194 TEKT4Q8WW24 435 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 HSPH1Q92598 858 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 TLCD1Q96CP7 247 aa19.58■□□□□ 0.72
SPNS3-204ENST00000575194 CDC42EP4Q9H3Q1 356 aaKnown RBP19.58■□□□□ 0.72
SPNS3-204ENST00000575194 CNOT10Q9H9A5 744 aaKnown RBP19.58■□□□□ 0.72
SPNS3-204ENST00000575194 NOVA2Q9UNW9 492 aaKnown RBP19.58■□□□□ 0.72
SPNS3-204ENST00000575194 SRRM3A6NNA2 597 aaPredicted RBP19.57■□□□□ 0.72
SPNS3-204ENST00000575194 CST8O60676 142 aa19.57■□□□□ 0.72
SPNS3-204ENST00000575194 SHBGP04278 402 aa19.57■□□□□ 0.72
SPNS3-204ENST00000575194 ARSEP51690 589 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms