RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 KIAA1958Q8N8K9 716 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 ZSCAN31Q96LW9 406 aaPredicted RBP12.77□□□□□ -0.37
CTNS-208ENST00000574218 FSCN3Q9NQT6 498 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 APOBEC2Q9Y235 224 aaKnown RBP12.77□□□□□ -0.37
CTNS-208ENST00000574218 GPSM3Q9Y4H4 160 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 SNX9Q9Y5X1 595 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 PLXNB3Q9ULL4 1909 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 ARHGAP33O14559 1287 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 SLC6A11P48066 632 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 PPP3CCP48454 512 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 ZNF131P52739 623 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 TRIP6Q15654 476 aaKnown RBP12.76□□□□□ -0.37
CTNS-208ENST00000574218 MAPRE1Q15691 268 aaKnown RBP12.76□□□□□ -0.37
CTNS-208ENST00000574218 VSTM1Q6UX27 236 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 DEFB119Q8N690 84 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 CSGALNACT2Q8N6G5 542 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 TOP6BLQ8N6T0 577 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 LRRC52Q8N7C0 313 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 NOC3LQ8WTT2 800 aaKnown RBP12.76□□□□□ -0.37
CTNS-208ENST00000574218 HVCN1Q96D96 273 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 SPATA17Q96L03 361 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 AK8Q96MA6 479 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 CEP295NLQ96MC4 621 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 SMPD4Q9NXE4 827 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 TBC1D14Q9P2M4 693 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 SUSD2Q9UGT4 822 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 ITGA11Q9UKX5 1188 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 EXOC7Q9UPT5 735 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 CPQQ9Y646 472 aa12.76□□□□□ -0.37
CTNS-208ENST00000574218 TBC1D3BA6NDS4 549 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 TISP43B9A030 160 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 TRIM66O15016 1216 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 NDUFS2O75306 463 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 LDHAP00338 332 aaKnown RBP12.75□□□□□ -0.37
CTNS-208ENST00000574218 TMEM191BP0C7N4 346 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 FTH1P19P0C7X4 201 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 MBL2P11226 248 aaPredicted RBP12.75□□□□□ -0.37
CTNS-208ENST00000574218 HOXB2P14652 356 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 GNSP15586 552 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 FAM193AP78312 1265 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 SLC7A9P82251 487 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 RBP5P82980 135 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 CYP27A1Q02318 531 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 GAD2Q05329 585 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 MYO1EQ12965 1108 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 SLC14A1Q13336 389 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 PLEKHG6Q3KR16 790 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 SOWAHCQ53LP3 525 aaPredicted RBP12.75□□□□□ -0.37
CTNS-208ENST00000574218 SYCP2LQ5T4T6 812 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 ARL6IP4Q66PJ3 421 aaKnown RBP12.75□□□□□ -0.37
CTNS-208ENST00000574218 SDE2Q6IQ49 451 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 IGSF10Q6WRI0 2623 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 OSTM1Q86WC4 334 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 ZNF513Q8N8E2 541 aaPredicted RBP12.75□□□□□ -0.37
CTNS-208ENST00000574218 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
CTNS-208ENST00000574218 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 LRRC15Q8TF66 581 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 MYLPFQ96A32 169 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 SLITRK1Q96PX8 696 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 SYT15Q9BQS2 421 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 FAM213AQ9BRX8 229 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 CAPN10Q9HC96 672 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 ZDHHC4Q9NPG8 344 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 DNAAF2Q9NVR5 837 aaKnown RBP12.75□□□□□ -0.37
CTNS-208ENST00000574218 RBAKQ9NYW8 714 aaPredicted RBP12.75□□□□□ -0.37
CTNS-208ENST00000574218 CFAP97Q9P2B7 532 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 STYXL1Q9Y6J8 313 aa12.75□□□□□ -0.37
CTNS-208ENST00000574218 SHROOM3Q8TF72 1996 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 A0A1W2PQD8 194 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 ANTXRLA6NF34 631 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 SCAMP3O14828 347 aaKnown RBP12.74□□□□□ -0.37
CTNS-208ENST00000574218 SH3BP5O60239 455 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 ZNF217O75362 1048 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 CD59P13987 128 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 PLCG1P19174 1290 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 BDNFP23560 247 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 KIR2DL1P43626 348 aaPredicted RBP12.74□□□□□ -0.37
CTNS-208ENST00000574218 MCM6Q14566 821 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 GAB4Q2WGN9 574 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 EMC10Q5UCC4 262 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 TDRD10Q5VZ19 366 aaKnown RBP12.74□□□□□ -0.37
CTNS-208ENST00000574218 NAXDQ8IW45 347 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 BRSK2Q8IWQ3 736 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 ADGRG2Q8IZP9 1017 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 C1orf127Q8N9H9 656 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 ADAMTS14Q8WXS8 1223 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 RAD54LQ92698 747 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 ANKRD36BP1Q96IX9 119 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 HSPA12BQ96MM6 686 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 PKMYT1Q99640 499 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 FAM124BQ9H5Z6 455 aaPredicted RBP12.74□□□□□ -0.37
CTNS-208ENST00000574218 GDAP2Q9NXN4 497 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 CALCOCO1Q9P1Z2 691 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 DEC1Q9P2X7 70 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 CDH9Q9ULB4 789 aa12.74□□□□□ -0.37
CTNS-208ENST00000574218 ADAM23O75077 832 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 PSMC1P62191 440 aaKnown RBP12.73□□□□□ -0.37
CTNS-208ENST00000574218 IFRD2Q12894 506 aaPredicted RBP12.73□□□□□ -0.37
CTNS-208ENST00000574218 CCDC142Q17RM4 750 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms