RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 CNOT7Q9UIV1 285 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 HSF4Q9ULV5 492 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 SHOC2Q9UQ13 582 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 CNTN6Q9UQ52 1028 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 CAMK2AQ9UQM7 478 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 CDY1Q9Y6F8 540 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 PNPLA7Q6ZV29 1317 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 CDHR4A6H8M9 788 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 SAC3D1A6NKF1 404 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 TBKBP1A7MCY6 615 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 PTGES3LE9PB15 166 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 E9PLN8 166 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 H3BNC9 293 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 H7C0S8 307 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 MASP2O00187 686 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 HRKO00198 91 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 POLRMTO00411 1230 aaKnown RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 TSPAN4O14817 238 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 SEPT4O43236 478 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 TSPAN9O75954 239 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 CER1O95813 267 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 SCGB1D1O95968 90 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 RNASE1P07998 156 aaKnown RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 HSP90AB1P08238 724 aaKnown RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 ITGB5P18084 799 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 FBLN1P23142 703 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 PSMA4P25789 261 aaKnown RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 OAS2P29728 719 aaKnown RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 LRPAP1P30533 357 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ZEB1P37275 1124 aaPredicted RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 MLH1P40692 756 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 MAGEA10P43363 369 aaPredicted RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 CDK7P50613 346 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ADCY7P51828 1080 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 DGKEP52429 567 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 RRADP55042 308 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 NCKAP1LP55160 1127 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 CREB5Q02930 508 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 TCF15Q12870 199 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 CDC16Q13042 620 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 PDCLQ13371 301 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 CAMK1Q14012 370 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 DOC2BQ14184 412 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 CSHL1Q14406 222 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 BECN1Q14457 450 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 NFIXQ14938 502 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 CDC37Q16543 378 aaPredicted RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 P3H1Q32P28 736 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 GALNTL6Q49A17 601 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 TBC1D10BQ4KMP7 808 aaPredicted RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 ABLIM2Q6H8Q1 611 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 SLC30A6Q6NXT4 461 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 LAYNQ6UX15 382 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 GET4Q7L5D6 327 aaPredicted RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 RASGRP2Q7LDG7 609 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 PPP1R32Q7Z5V6 425 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 VSIG10LQ86VR7 867 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ZNF280BQ86YH2 543 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 TEX11Q8IYF3 940 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 SPARTQ8N0X7 666 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ANKRD44Q8N8A2 993 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 PDPRQ8NCN5 879 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 TBC1D15Q8TC07 691 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 BPIFB1Q8TDL5 484 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 CREB3L4Q8TEY5 395 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 FNIP1Q8TF40 1166 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ZCCHC14Q8WYQ9 949 aaKnown RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 USP6NLQ92738 828 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ZNF775Q96BV0 537 aaPredicted RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 VMP1Q96GC9 406 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 LIN37Q96GY3 246 aaPredicted RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 RBM17Q96I25 401 aaKnown RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 KIRREL1Q96J84 757 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ZNF668Q96K58 619 aaPredicted RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 PWWP2AQ96N64 755 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 KLHL32Q96NJ5 620 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 SLC46A1Q96NT5 459 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 VKORC1Q9BQB6 163 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 NUDT22Q9BRQ3 303 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 FUZQ9BT04 418 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 CARD11Q9BXL7 1154 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 TRIM5Q9C035 493 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ARHGAP39Q9C0H5 1083 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 KIAA1683Q9H0B3 1180 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ZCWPW1Q9H0M4 648 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 OR10A2Q9H208 303 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 RMI1Q9H9A7 625 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 UNKLQ9H9P5 680 aaKnown RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 VEZTQ9HBM0 779 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 PAK6Q9NQU5 681 aaPredicted RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 LIN7CQ9NUP9 197 aaKnown RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 MRPS18AQ9NVS2 196 aaKnown RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 SIRT5Q9NXA8 310 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 TBC1D14Q9P2M4 693 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 DNAJB11Q9UBS4 358 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 RPS6KA6Q9UK32 745 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ADAMTS6Q9UKP5 1117 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ZHX1Q9UKY1 873 aaPredicted RBP2.32□□□□□ -2.04
CHD3-217ENST00000574022 BAG5Q9UL15 447 aa2.32□□□□□ -2.04
CHD3-217ENST00000574022 ZNF215Q9UL58 517 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms