RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 TBC1D3BA6NDS4 549 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 SLC9A3R1O14745 358 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-208ENST00000573716 ZBTB24O43167 697 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-208ENST00000573716 ATP2C2O75185 946 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 CAPNS1P04632 268 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 SYPP08247 313 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 ADH5P11766 374 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 TCF3P15923 654 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 PLCG1P19174 1290 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 SCP2P22307 547 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 ANXA13P27216 316 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 PCSK1P29120 753 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 GRIK1P39086 918 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 GRIA2P42262 883 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 KIR2DL1P43626 348 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-208ENST00000573716 PSMC1P62191 440 aaKnown RBP13.04□□□□□ -0.32
PRPF8-208ENST00000573716 HMGN5P82970 282 aaKnown RBP13.04□□□□□ -0.32
PRPF8-208ENST00000573716 PLEKHG6Q3KR16 790 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 HSF5Q4G112 596 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-208ENST00000573716 PEAR1Q5VY43 1037 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-208ENST00000573716 C4orf50Q6ZRC1 276 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 ADGRG2Q8IZP9 1017 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 TMEM86AQ8N2M4 240 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 CSGALNACT2Q8N6G5 542 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 NAT16Q8N8M0 369 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 CALML4Q96GE6 196 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 HSPA12BQ96MM6 686 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 PKMYT1Q99640 499 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 FAM213AQ9BRX8 229 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 CALCOCO1Q9P1Z2 691 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 MAGEC2Q9UBF1 373 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-208ENST00000573716 CYP8B1Q9UNU6 501 aa13.04□□□□□ -0.32
PRPF8-208ENST00000573716 PLXNB3Q9ULL4 1909 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 FREM2Q5SZK8 3169 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-208ENST00000573716 GABRG2P18507 467 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 BDNFP23560 247 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 TNFRSF4P43489 277 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 USP46P62068 366 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 GTF2BQ00403 316 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 CYP27A1Q02318 531 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 IFRD2Q12894 506 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-208ENST00000573716 MCM6Q14566 821 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 CFAP221Q4G0U5 840 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 RHBDF2Q6PJF5 856 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 CRELD2Q6UXH1 353 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-208ENST00000573716 NAXDQ8IW45 347 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 KCTD17Q8N5Z5 321 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 ZNF513Q8N8E2 541 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-208ENST00000573716 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 TRIML1Q8N9V2 468 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 CACTINQ8WUQ7 758 aaKnown RBP13.03□□□□□ -0.32
PRPF8-208ENST00000573716 ADAMTS14Q8WXS8 1223 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 SAAL1Q96ER3 474 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 FUBP3Q96I24 572 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRPF8-208ENST00000573716 BBC3Q96PG8 261 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-208ENST00000573716 SYT15Q9BQS2 421 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 RNF38Q9H0F5 515 aa13.03□□□□□ -0.32
PRPF8-208ENST00000573716 APOBEC2Q9Y235 224 aaKnown RBP13.03□□□□□ -0.32
PRPF8-208ENST00000573716 R3HCC1Q9Y3T6 440 aaKnown RBP13.03□□□□□ -0.32
PRPF8-208ENST00000573716 FLNBO75369 2602 aaKnown RBP13.02□□□□□ -0.32
PRPF8-208ENST00000573716 NDUFS2O75306 463 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 PDGFRBP09619 1106 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 MBL2P11226 248 aaPredicted RBP13.02□□□□□ -0.33
PRPF8-208ENST00000573716 HOXB2P14652 356 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 ABCD1P33897 745 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 MAGEA11P43364 429 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 LHX1P48742 406 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 ZNF131P52739 623 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 WNT7BP56706 349 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 LY6G5CQ5SRR4 150 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 C10orf76Q5T2E6 689 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 BTBD8Q5XKL5 378 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 SCARA3Q6AZY7 606 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 CCNI2Q6ZMN8 369 aaPredicted RBP13.02□□□□□ -0.33
PRPF8-208ENST00000573716 DENND5BQ6ZUT9 1274 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 TRMT11Q7Z4G4 463 aaKnown RBP13.02□□□□□ -0.33
PRPF8-208ENST00000573716 NT5DC4Q86YG4 428 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 SLC41A1Q8IVJ1 513 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 SETD7Q8WTS6 366 aaKnown RBP13.02□□□□□ -0.33
PRPF8-208ENST00000573716 KCNN1Q92952 543 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 MYLPFQ96A32 169 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 DNAAF2Q9NVR5 837 aaKnown RBP13.02□□□□□ -0.33
PRPF8-208ENST00000573716 APC2O95996 2303 aa13.02□□□□□ -0.33
PRPF8-208ENST00000573716 PTPRBP23467 1997 aa13.01□□□□□ -0.33
PRPF8-208ENST00000573716 IGHV1OR15-9A0A0B4J2B8 117 aa13.01□□□□□ -0.33
PRPF8-208ENST00000573716 ZNF840PA6NDX5 716 aa13.01□□□□□ -0.33
PRPF8-208ENST00000573716 CHRM1P11229 460 aaPredicted RBP13.01□□□□□ -0.33
PRPF8-208ENST00000573716 EIF2DP41214 584 aaKnown RBP13.01□□□□□ -0.33
PRPF8-208ENST00000573716 UBA7P41226 1012 aa13.01□□□□□ -0.33
PRPF8-208ENST00000573716 SLC7A9P82251 487 aa13.01□□□□□ -0.33
PRPF8-208ENST00000573716 POSTNQ15063 836 aa13.01□□□□□ -0.33
PRPF8-208ENST00000573716 ANO4Q32M45 955 aa13.01□□□□□ -0.33
PRPF8-208ENST00000573716 LRRC52Q8N7C0 313 aa13.01□□□□□ -0.33
PRPF8-208ENST00000573716 ZSWIM2Q8NEG5 633 aa13.01□□□□□ -0.33
PRPF8-208ENST00000573716 SPATA17Q96L03 361 aa13.01□□□□□ -0.33
PRPF8-208ENST00000573716 RBAKQ9NYW8 714 aaPredicted RBP13.01□□□□□ -0.33
PRPF8-208ENST00000573716 EHD2Q9NZN4 543 aa13.01□□□□□ -0.33
PRPF8-208ENST00000573716 ITGA11Q9UKX5 1188 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms