RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 PBX1P40424 430 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 PLA2G4AP47712 749 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 KIF11P52732 1056 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 PDE4CQ08493 712 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 RAB41Q5JT25 222 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 PIGZQ86VD9 579 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 RNF214Q8ND24 703 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 PDZD8Q8NEN9 1154 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 SCAMP5Q8TAC9 235 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 SLC35F5Q8WV83 523 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 KCTD13Q8WZ19 329 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 MCRS1Q96EZ8 462 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 NECAB3Q96P71 396 aaPredicted RBP18.23■□□□□ 0.51
LITAF-212ENST00000573332 SLITRK1Q96PX8 696 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 TASP1Q9H6P5 420 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 TRPV4Q9HBA0 871 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 IGSF9Q9P2J2 1179 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 USP3Q9Y6I4 520 aa18.23■□□□□ 0.51
LITAF-212ENST00000573332 PFKLP17858 780 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 TAF10Q12962 218 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 SNX30Q5VWJ9 437 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 GPRIN1Q7Z2K8 1008 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 MON1AQ86VX9 555 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 UBA3Q8TBC4 463 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 MRPS31Q92665 395 aaKnown RBP18.22■□□□□ 0.51
LITAF-212ENST00000573332 EDEM3Q9BZQ6 932 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 ACP6Q9NPH0 428 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 NLRC4Q9NPP4 1024 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 TRPM5Q9NZQ8 1165 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 MYO6Q9UM54 1294 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 PCDHGC3Q9UN70 934 aa18.22■□□□□ 0.51
LITAF-212ENST00000573332 ZNF840PA6NDX5 716 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 THAP12O43422 761 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 CALCAP01258 141 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 ZDHHC11BP0C7U3 371 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 PNMA6AP0CW24 399 aaPredicted RBP18.21■□□□□ 0.51
LITAF-212ENST00000573332 SSTR3P32745 418 aaPredicted RBP18.21■□□□□ 0.51
LITAF-212ENST00000573332 SOX5P35711 763 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 STAT1P42224 750 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 GPD2P43304 727 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 CYP4F8P98187 520 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 FIGNQ5HY92 759 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 GPR158Q5T848 1215 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 MTSS1LQ765P7 747 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 SLC47A2Q86VL8 602 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 RNF135Q8IUD6 432 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 STK32AQ8WU08 396 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 FBXO32Q969P5 355 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 HSFY1Q96LI6 401 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 ZSWIM3Q96MP5 696 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 ASB16Q96NS5 453 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 SPAG5Q96R06 1193 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 SLC46A2Q9BY10 475 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 IFNKQ9P0W0 207 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 LIMD1Q9UGP4 676 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 SCML2Q9UQR0 700 aa18.21■□□□□ 0.51
LITAF-212ENST00000573332 DOCK6Q96HP0 2047 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 M0QYV0 167 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 TULP2O00295 520 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 TPM3P06753 285 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 CYP11B1P15538 503 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 RPL34P49207 117 aaKnown RBP18.2■□□□□ 0.5
LITAF-212ENST00000573332 HTR4Q13639 388 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 STXBP5Q5T5C0 1151 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 CCDC186Q7Z3E2 898 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 SCML4Q8N228 414 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 SMARCD2Q92925 531 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 SECISBP2LQ93073 1101 aaKnown RBP18.2■□□□□ 0.5
LITAF-212ENST00000573332 NUP58Q9BVL2 599 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 TTYH3Q9C0H2 523 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 LHX5Q9H2C1 402 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 KCNK12Q9HB15 430 aa18.2■□□□□ 0.5
LITAF-212ENST00000573332 TCF20Q9UGU0 1960 aaKnown RBP18.19■□□□□ 0.5
LITAF-212ENST00000573332 CBFA2T2O43439 604 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 ECI2O75521 394 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 IFRD2Q12894 506 aaPredicted RBP18.19■□□□□ 0.5
LITAF-212ENST00000573332 FAM78AQ5JUQ0 283 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 TXNDC8Q6A555 127 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 PM20D1Q6GTS8 502 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 PMF1Q6P1K2 205 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 DENND1BQ6P3S1 775 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 CACNA2D4Q7Z3S7 1137 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 ZNF677Q86XU0 584 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 FMNL3Q8IVF7 1028 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 CMTM8Q8IZV2 173 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 ZSCAN18Q8TBC5 510 aaPredicted RBP18.19■□□□□ 0.5
LITAF-212ENST00000573332 DDX1Q92499 740 aaKnown RBP18.19■□□□□ 0.5
LITAF-212ENST00000573332 BAP1Q92560 729 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 FGF14Q92915 247 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 E2F7Q96AV8 911 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 IQCDQ96DY2 449 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 COL25A1Q9BXS0 654 aaPredicted RBP18.19■□□□□ 0.5
LITAF-212ENST00000573332 XPO4Q9C0E2 1151 aaKnown RBP18.19■□□□□ 0.5
LITAF-212ENST00000573332 SLITRK6Q9H5Y7 841 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 LRRC4Q9HBW1 653 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 CYLDQ9NQC7 956 aa18.19■□□□□ 0.5
LITAF-212ENST00000573332 GFPT2O94808 682 aa18.18■□□□□ 0.5
LITAF-212ENST00000573332 OLFM2O95897 454 aa18.18■□□□□ 0.5
LITAF-212ENST00000573332 CFHP08603 1231 aa18.18■□□□□ 0.5
LITAF-212ENST00000573332 FCARP24071 287 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms