RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ANKRD20A12PQ8NF67 263 aa16.74■□□□□ 0.27
CHD3-215ENST00000572750 FGF14Q92915 247 aa16.74■□□□□ 0.27
CHD3-215ENST00000572750 MYRFLQ96LU7 910 aa16.74■□□□□ 0.27
CHD3-215ENST00000572750 KXD1Q9BQD3 176 aa16.74■□□□□ 0.27
CHD3-215ENST00000572750 LSM14BQ9BX40 385 aaKnown RBP16.74■□□□□ 0.27
CHD3-215ENST00000572750 KCNK12Q9HB15 430 aa16.74■□□□□ 0.27
CHD3-215ENST00000572750 CBX8Q9HC52 389 aa16.74■□□□□ 0.27
CHD3-215ENST00000572750 GDE1Q9NZC3 331 aa16.74■□□□□ 0.27
CHD3-215ENST00000572750 LIMA1Q9UHB6 759 aaKnown RBP16.74■□□□□ 0.27
CHD3-215ENST00000572750 ZFP37Q9Y6Q3 630 aaPredicted RBP16.74■□□□□ 0.27
CHD3-215ENST00000572750 NUMBLQ9Y6R0 609 aa16.74■□□□□ 0.27
CHD3-215ENST00000572750 HELZP42694 1942 aaKnown RBP16.74■□□□□ 0.27
CHD3-215ENST00000572750 MYO10Q9HD67 2058 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 LGALS16A8MUM7 142 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 RNF225M0QZC1 329 aaPredicted RBP16.73■□□□□ 0.27
CHD3-215ENST00000572750 MICAL2O94851 1124 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 NPR3P17342 541 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 CDK11BP21127 795 aaKnown RBP16.73■□□□□ 0.27
CHD3-215ENST00000572750 KLK7P49862 253 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 SLC5A3P53794 718 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 KCNMA1Q12791 1236 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 IQCB1Q15051 598 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 SGO2Q562F6 1265 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 FAM78AQ5JUQ0 283 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 GPR158Q5T848 1215 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 ARHGAP17Q68EM7 881 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 APTXQ7Z2E3 356 aaKnown RBP16.73■□□□□ 0.27
CHD3-215ENST00000572750 GPRIN1Q7Z2K8 1008 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 LUZP1Q86V48 1076 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 CEP295NLQ96MC4 621 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 TTLL2Q9BWV7 592 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 CSNK1G1Q9HCP0 422 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 UXTQ9UBK9 157 aaPredicted RBP16.73■□□□□ 0.27
CHD3-215ENST00000572750 TSPAN16Q9UKR8 245 aa16.73■□□□□ 0.27
CHD3-215ENST00000572750 SMTNL1A8MU46 457 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 BECN2A8MW95 431 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 ANHXE9PGG2 379 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 F11P03951 625 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 PAEPP09466 180 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 PNMA6AP0CW24 399 aaPredicted RBP16.72■□□□□ 0.27
CHD3-215ENST00000572750 FCARP24071 287 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 BRD2P25440 801 aaKnown RBP16.72■□□□□ 0.27
CHD3-215ENST00000572750 MFAP3P55082 362 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 ARHGAP15Q53QZ3 475 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 FKBP15Q5T1M5 1219 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 DPY19L2P1Q6NXN4 242 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 ENOSF1Q7L5Y1 443 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 TTC30AQ86WT1 665 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 NUP93Q8N1F7 819 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 SCAMP5Q8TAC9 235 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 ZSCAN18Q8TBC5 510 aaPredicted RBP16.72■□□□□ 0.27
CHD3-215ENST00000572750 TFAP2BQ92481 460 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 ASB16Q96NS5 453 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 DNAJC12Q9UKB3 198 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 SORCS3Q9UPU3 1222 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 FHOD1Q9Y613 1164 aa16.72■□□□□ 0.27
CHD3-215ENST00000572750 NCANO14594 1321 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 TPRP12270 2363 aaKnown RBP16.71■□□□□ 0.27
CHD3-215ENST00000572750 HHLA1C9JL84 531 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 O00370 1275 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 TNFRSF10BO14763 440 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 USP8P40818 1118 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 NBL1P41271 181 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 SIGLEC14Q08ET2 396 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 TXNDC8Q6A555 127 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 MTSS1LQ765P7 747 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 GPIHBP1Q8IV16 184 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 SHC3Q92529 594 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 MRPS31Q92665 395 aaKnown RBP16.71■□□□□ 0.27
CHD3-215ENST00000572750 ZSWIM1Q9BR11 485 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 RPP25Q9BUL9 199 aaKnown RBP16.71■□□□□ 0.27
CHD3-215ENST00000572750 DUSP16Q9BY84 665 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 SMG9Q9H0W8 520 aaKnown RBP16.71■□□□□ 0.27
CHD3-215ENST00000572750 TRPC7Q9HCX4 862 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 ACP6Q9NPH0 428 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 IGSF9Q9P2J2 1179 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 CNTN6Q9UQ52 1028 aa16.71■□□□□ 0.27
CHD3-215ENST00000572750 EP300Q09472 2414 aaPredicted RBP16.7■□□□□ 0.26
CHD3-215ENST00000572750 KIF26AQ9ULI4 1882 aaPredicted RBP16.7■□□□□ 0.26
CHD3-215ENST00000572750 NARSO43776 548 aaKnown RBP16.7■□□□□ 0.26
CHD3-215ENST00000572750 RTN3O95197 1032 aaPredicted RBP16.7■□□□□ 0.26
CHD3-215ENST00000572750 PRAMEF12O95522 483 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 VDRP11473 427 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 BCAT1P54687 386 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 UBXN1Q04323 297 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 TAF10Q12962 218 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 RAPGEF1Q13905 1077 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 SYCP1Q15431 976 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 KLHDC7AQ5VTJ3 777 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 TANGO2Q6ICL3 276 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 MAB21L3Q8N8X9 362 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 SMARCD2Q92925 531 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 FBXO32Q969P5 355 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 FAM81BQ96LP2 452 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 TASP1Q9H6P5 420 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 FAM207AQ9NSI2 230 aaPredicted RBP16.7■□□□□ 0.26
CHD3-215ENST00000572750 EHD2Q9NZN4 543 aa16.7■□□□□ 0.26
CHD3-215ENST00000572750 BAHCC1Q9P281 2608 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 ACACBO00763 2458 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 C2orf78A6NCI8 922 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms