RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 CGNL1Q0VF96 1302 aa5□□□□□ -1.61
NUP88-202ENST00000570937 ALS2Q96Q42 1657 aa5□□□□□ -1.61
NUP88-202ENST00000570937 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5□□□□□ -1.61
NUP88-202ENST00000570937 MGST3O14880 152 aa5□□□□□ -1.61
NUP88-202ENST00000570937 VPS4BO75351 444 aa5□□□□□ -1.61
NUP88-202ENST00000570937 THP07101 528 aa5□□□□□ -1.61
NUP88-202ENST00000570937 CACNA2D1P54289 1103 aa5□□□□□ -1.61
NUP88-202ENST00000570937 GPSM2P81274 684 aa5□□□□□ -1.61
NUP88-202ENST00000570937 BOP1Q14137 746 aaKnown RBP5□□□□□ -1.61
NUP88-202ENST00000570937 LRRC41Q15345 812 aa5□□□□□ -1.61
NUP88-202ENST00000570937 MINDY4Q4G0A6 757 aa5□□□□□ -1.61
NUP88-202ENST00000570937 ANO6Q4KMQ2 910 aa5□□□□□ -1.61
NUP88-202ENST00000570937 KAZNQ674X7 775 aa5□□□□□ -1.61
NUP88-202ENST00000570937 TSHZ1Q6ZSZ6 1077 aa5□□□□□ -1.61
NUP88-202ENST00000570937 OVCH2Q7RTZ1 564 aa5□□□□□ -1.61
NUP88-202ENST00000570937 DAAM2Q86T65 1068 aa5□□□□□ -1.61
NUP88-202ENST00000570937 ARHGEF25Q86VW2 580 aa5□□□□□ -1.61
NUP88-202ENST00000570937 MAGEB6Q8N7X4 407 aa5□□□□□ -1.61
NUP88-202ENST00000570937 ZBTB34Q8NCN2 500 aa5□□□□□ -1.61
NUP88-202ENST00000570937 B3GALNT2Q8NCR0 500 aa5□□□□□ -1.61
NUP88-202ENST00000570937 FAM46DQ8NEK8 389 aa5□□□□□ -1.61
NUP88-202ENST00000570937 TOR1AIP2Q8NFQ8 470 aa5□□□□□ -1.61
NUP88-202ENST00000570937 PPP1R35Q8TAP8 253 aa5□□□□□ -1.61
NUP88-202ENST00000570937 JDP2Q8WYK2 163 aa5□□□□□ -1.61
NUP88-202ENST00000570937 FBXL20Q96IG2 436 aa5□□□□□ -1.61
NUP88-202ENST00000570937 CRAMP1Q96RY5 1269 aa5□□□□□ -1.61
NUP88-202ENST00000570937 NELL2Q99435 816 aa5□□□□□ -1.61
NUP88-202ENST00000570937 SPATA5L1Q9BVQ7 753 aa5□□□□□ -1.61
NUP88-202ENST00000570937 ARMT1Q9H993 441 aa5□□□□□ -1.61
NUP88-202ENST00000570937 CNNM1Q9NRU3 951 aa5□□□□□ -1.61
NUP88-202ENST00000570937 KLC4Q9NSK0 619 aa5□□□□□ -1.61
NUP88-202ENST00000570937 PIH1D1Q9NWS0 290 aaKnown RBP5□□□□□ -1.61
NUP88-202ENST00000570937 COX11Q9Y6N1 276 aa5□□□□□ -1.61
NUP88-202ENST00000570937 SPATA31A5Q5VU36 1347 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 SPATA31A7Q8IWB4 1347 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 COL14A1Q05707 1796 aaKnown RBP4.99□□□□□ -1.61
NUP88-202ENST00000570937 ADM5C9JUS6 153 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 DCLK1O15075 740 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 FYB1O15117 783 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 PRPF3O43395 683 aaKnown RBP4.99□□□□□ -1.61
NUP88-202ENST00000570937 CTNND1O60716 968 aaKnown RBP4.99□□□□□ -1.61
NUP88-202ENST00000570937 PPFIA2O75334 1257 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 UNC5CO95185 931 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 CHRM3P20309 590 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 GRIA3P42263 894 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 ARFIP2P53365 341 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 MAPK10P53779 464 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 TXNRD1Q16881 649 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 AMOTQ4VCS5 1084 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 ZNF362Q5T0B9 420 aaPredicted RBP4.99□□□□□ -1.61
NUP88-202ENST00000570937 TOM1L2Q6ZVM7 507 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 KRT27Q7Z3Y8 459 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 ADGRG3Q86Y34 549 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 TCP11L2Q8N4U5 519 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 CELF5Q8N6W0 485 aaKnown RBP4.99□□□□□ -1.61
NUP88-202ENST00000570937 KBTBD7Q8WVZ9 684 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 BBC3Q96PG8 261 aaPredicted RBP4.99□□□□□ -1.61
NUP88-202ENST00000570937 ALG8Q9BVK2 526 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 TMEM60Q9H2L4 133 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 C1orf112Q9NSG2 853 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 SEMA4GQ9NTN9 838 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 SLC17A6Q9P2U8 582 aa4.99□□□□□ -1.61
NUP88-202ENST00000570937 MARF1Q9Y4F3 1742 aaKnown RBP4.99□□□□□ -1.61
NUP88-202ENST00000570937 SPATA31A1Q5TZJ5 1347 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 ADGRA2Q96PE1 1338 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 NWD2Q9ULI1 1742 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 VWC2LB2RUY7 222 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 ERC2O15083 957 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 TSPAN6O43657 245 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 ORC4O43929 436 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 ATXN1LP0C7T5 689 aaKnown RBP4.98□□□□□ -1.61
NUP88-202ENST00000570937 NPR1P16066 1061 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 FBLP22087 321 aaKnown RBP4.98□□□□□ -1.61
NUP88-202ENST00000570937 CD6P30203 668 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 VIPR2P41587 438 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 KCNJ5P48544 419 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 AMPHP49418 695 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 ELLP55199 621 aaPredicted RBP4.98□□□□□ -1.61
NUP88-202ENST00000570937 LONRF3Q496Y0 759 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 RBM20Q5T481 1227 aaKnown RBP4.98□□□□□ -1.61
NUP88-202ENST00000570937 SFRP4Q6FHJ7 346 aaPredicted RBP4.98□□□□□ -1.61
NUP88-202ENST00000570937 NPNTQ6UXI9 565 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 PEG10Q86TG7 708 aaKnown RBP4.98□□□□□ -1.61
NUP88-202ENST00000570937 KIAA0319LQ8IZA0 1049 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 TFAP2BQ92481 460 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 FAM136AQ96C01 138 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 PBKQ96KB5 322 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 SLC46A1Q96NT5 459 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 MOGAT1Q96PD6 335 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 TIMP4Q99727 224 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 TRIM54Q9BYV2 358 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 DPH1Q9BZG8 443 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 R3HDMLQ9H3Y0 253 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 PANK3Q9H999 370 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 STAP2Q9UGK3 403 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 TCEAL9Q9UHQ7 104 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 NOB1Q9ULX3 412 aaKnown RBP4.98□□□□□ -1.61
NUP88-202ENST00000570937 KNSTRNQ9Y448 316 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 ENTPD2Q9Y5L3 495 aa4.98□□□□□ -1.61
NUP88-202ENST00000570937 CD163L1Q9NR16 1453 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms