RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TMEM161BQ8NDZ6 487 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 SLC26A7Q8TE54 656 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 GDPD5Q8WTR4 605 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 APBB2Q92870 758 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 SIKE1Q9BRV8 207 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 CLIC5Q9NZA1 410 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 EFR3BQ9Y2G0 817 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 PLLPQ9Y342 182 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 CCNT2O60583 730 aaKnown RBP16.06■□□□□ 0.16
SMG6-207ENST00000570756 RPL22P35268 128 aaKnown RBP16.06■□□□□ 0.16
SMG6-207ENST00000570756 MAGEA8P43361 318 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 PIGHQ14442 188 aaPredicted RBP16.06■□□□□ 0.16
SMG6-207ENST00000570756 CRY2Q49AN0 593 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 HSF5Q4G112 596 aaPredicted RBP16.06■□□□□ 0.16
SMG6-207ENST00000570756 LGSNQ5TDP6 509 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 B3GNT6Q6ZMB0 384 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 SLC26A11Q86WA9 606 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 ICA1LQ8NDH6 482 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 GPRC5CQ9NQ84 441 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
SMG6-207ENST00000570756 PCDHB4Q9Y5E5 795 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 HNRNPRO43390 633 aaKnown RBP16.06■□□□□ 0.16
SMG6-207ENST00000570756 FAM155BO75949 473 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 TMEM63AO94886 807 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 GDF11O95390 407 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 CALB1P05937 261 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 CPOXP36551 454 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 RPL5P46777 297 aaKnown RBP16.06■□□□□ 0.16
SMG6-207ENST00000570756 PDE1BQ01064 536 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 OTUD4Q01804 1114 aaKnown RBP16.06■□□□□ 0.16
SMG6-207ENST00000570756 WASHC5Q12768 1159 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 MSLNQ13421 630 aaPredicted RBP16.06■□□□□ 0.16
SMG6-207ENST00000570756 CHI3L2Q15782 390 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 HSP90AA5PQ58FG0 334 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 ACBD5Q5T8D3 534 aaPredicted RBP16.06■□□□□ 0.16
SMG6-207ENST00000570756 LPCAT4Q643R3 524 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 PRR5LQ6MZQ0 368 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 DCUN1D2Q6PH85 259 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 C15orf39Q6ZRI6 1047 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 NUDCD3Q8IVD9 361 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 FLAD1Q8NFF5 587 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 ACTL9Q8TC94 416 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 PLEKHG4BQ96PX9 1271 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 SIRPGQ9P1W8 387 aa16.06■□□□□ 0.16
SMG6-207ENST00000570756 SIPA1L1O43166 1804 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 TXNDC9O14530 226 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 STRNO43815 780 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 PEX1O43933 1283 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 CFHP08603 1231 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 MMP8P22894 467 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 ELK3P41970 407 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 INHBCP55103 352 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 GDF10P55107 478 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 YWHAGP61981 247 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMG6-207ENST00000570756 TCP10Q12799 353 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 DLG1Q12959 904 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 DNAJC24Q6P3W2 148 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 TMEM270Q6UE05 265 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 IRGQQ8WZA9 623 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 CATSPER2Q96P56 530 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 HBS1LQ9Y450 684 aaKnown RBP16.05■□□□□ 0.16
SMG6-207ENST00000570756 TRIM49D1C9J1S8 452 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 F8VP50 259 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 SNRPAP09012 282 aaKnown RBP16.05■□□□□ 0.16
SMG6-207ENST00000570756 KITP10721 976 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 ACO1P21399 889 aaKnown RBP16.05■□□□□ 0.16
SMG6-207ENST00000570756 PEX2P28328 305 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 BASP1P80723 227 aaKnown RBP16.05■□□□□ 0.16
SMG6-207ENST00000570756 TAP1Q03518 808 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 DEUP1Q05D60 604 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 TTLL12Q14166 644 aaPredicted RBP16.05■□□□□ 0.16
SMG6-207ENST00000570756 WDR78Q5VTH9 848 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 UGT2A3Q6UWM9 527 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 MCEEQ96PE7 176 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 MECRQ9BV79 373 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 Q9H521 79 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 PKD2L1Q9P0L9 805 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 ADAMTS6Q9UKP5 1117 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 SYNPO2Q9UMS6 1093 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 RPS6KL1Q9Y6S9 549 aa16.05■□□□□ 0.16
SMG6-207ENST00000570756 C15orf38-AP3S2A0A0A6YYH1 394 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 DDTLA6NHG4 134 aaPredicted RBP16.04■□□□□ 0.16
SMG6-207ENST00000570756 KBTBD13C9JR72 458 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 KLHL2O95198 593 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 NPTX2P47972 431 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 SCNN1BP51168 640 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 DYNLT1P63172 113 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 CUL2Q13617 745 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 TRIP10Q15642 601 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 TEX44Q53QW1 395 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 PLA2G4FQ68DD2 849 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 POLNQ7Z5Q5 900 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 ARPINQ7Z6K5 226 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 NLGN1Q8N2Q7 840 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 SPIRE2Q8WWL2 714 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 MAML3Q96JK9 1138 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 PRICKLE1Q96MT3 831 aaPredicted RBP16.04■□□□□ 0.16
SMG6-207ENST00000570756 SMYD3Q9H7B4 428 aa16.04■□□□□ 0.16
SMG6-207ENST00000570756 KMT5AQ9NQR1 393 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 207.7 ms