RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 HOXD12P35452 270 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 TOB1P50616 345 aaPredicted RBP7.74□□□□□ -1.17
SMG6-205ENST00000570659 PSMC1P62191 440 aaKnown RBP7.74□□□□□ -1.17
SMG6-205ENST00000570659 SEMG2Q02383 582 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 PPP2R3AQ06190 1150 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 RESTQ13127 1097 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 DNAJC3Q13217 504 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 SLC14A1Q13336 389 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 PDIA5Q14554 519 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 TAF12Q16514 161 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 SPDYCQ5MJ68 293 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 PRAMEF14Q5SWL7 426 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 CACUL1Q86Y37 369 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 TMEM25Q86YD3 366 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 ZNF513Q8N8E2 541 aaPredicted RBP7.74□□□□□ -1.17
SMG6-205ENST00000570659 FAM181AQ8N9Y4 354 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 NSUN7Q8NE18 718 aaKnown RBP7.74□□□□□ -1.17
SMG6-205ENST00000570659 CEP76Q8TAP6 659 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 SPPL2BQ8TCT7 592 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 TRMT2BQ96GJ1 504 aaKnown RBP7.74□□□□□ -1.17
SMG6-205ENST00000570659 MRGPRX1Q96LB2 322 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 FIZ1Q96SL8 496 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 NTPCRQ9BSD7 190 aaKnown RBP7.74□□□□□ -1.17
SMG6-205ENST00000570659 OXCT2Q9BYC2 517 aaPredicted RBP7.74□□□□□ -1.17
SMG6-205ENST00000570659 TMEM206Q9H813 350 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 PLEKHA5Q9HAU0 1116 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 CRTAC1Q9NQ79 661 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 TM7SF3Q9NS93 570 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 DAXXQ9UER7 740 aaPredicted RBP7.74□□□□□ -1.17
SMG6-205ENST00000570659 APOBEC2Q9Y235 224 aaKnown RBP7.74□□□□□ -1.17
SMG6-205ENST00000570659 PCDHB9Q9Y5E1 797 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 PCDHB5Q9Y5E4 795 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 CPQQ9Y646 472 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 DOPEY2Q9Y3R5 2298 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 PLXNA2O75051 1894 aa7.74□□□□□ -1.17
SMG6-205ENST00000570659 A0A0B4J269 797 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 CLDN3O15551 220 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 ALDH1A2O94788 518 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 NFATC1O95644 943 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 CSH1P0DML2 217 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 CSH2P0DML3 217 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 GRIA2P42262 883 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 CSNK1EP49674 416 aaKnown RBP7.73□□□□□ -1.17
SMG6-205ENST00000570659 AMPD2Q01433 879 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 TLE3Q04726 772 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 ME3Q16798 604 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 KIF19Q2TAC6 998 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 INTS6LQ5JSJ4 861 aaKnown RBP7.73□□□□□ -1.17
SMG6-205ENST00000570659 EOGTQ5NDL2 527 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 C10orf76Q5T2E6 689 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 ZPBP2Q6X784 338 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 USP49Q70CQ1 688 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 SCN4BQ8IWT1 228 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 BBS7Q8IWZ6 715 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 RGL4Q8IZJ4 473 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 FAM177A1Q8N128 213 aaPredicted RBP7.73□□□□□ -1.17
SMG6-205ENST00000570659 IPO4Q8TEX9 1081 aaKnown RBP7.73□□□□□ -1.17
SMG6-205ENST00000570659 DNASE2BQ8WZ79 361 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 NAP1L4Q99733 375 aaKnown RBP7.73□□□□□ -1.17
SMG6-205ENST00000570659 ORAI3Q9BRQ5 295 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMG6-205ENST00000570659 GPR174Q9BXC1 333 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 TRIM4Q9C037 500 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 MKRN2Q9H000 416 aaKnown RBP7.73□□□□□ -1.17
SMG6-205ENST00000570659 CPNE5Q9HCH3 593 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 LRWD1Q9UFC0 647 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 SNX11Q9Y5W9 270 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 PTPRJQ12913 1337 aa7.73□□□□□ -1.17
SMG6-205ENST00000570659 BOD1L1Q8NFC6 3051 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 USP9XQ93008 2570 aaPredicted RBP7.72□□□□□ -1.17
SMG6-205ENST00000570659 UTP20O75691 2785 aaKnown RBP7.72□□□□□ -1.17
SMG6-205ENST00000570659 FLNCQ14315 2725 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 ZNF840PA6NDX5 716 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 OGTO15294 1046 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 OAS1P00973 400 aaKnown RBP7.72□□□□□ -1.17
SMG6-205ENST00000570659 APODP05090 189 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 SYPP08247 313 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 ADH5P11766 374 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 PLS3P13797 630 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 GRIK1P39086 918 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 NCKAP1LP55160 1127 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 SLC7A9P82251 487 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 CCDC173Q0VFZ6 552 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 TMEM132DQ14C87 1099 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 SHBQ15464 509 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 SPACA3Q8IXA5 215 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 ADGRF2Q8IZF7 708 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 IGSF22Q8N9C0 903 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 SPATA18Q8TC71 538 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 RHBDD1Q8TEB9 315 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 SNX29Q8TEQ0 813 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 KBTBD7Q8WVZ9 684 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 SPIRE2Q8WWL2 714 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 MYLPFQ96A32 169 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 TOE1Q96GM8 510 aaKnown RBP7.72□□□□□ -1.17
SMG6-205ENST00000570659 CCSER1Q9C0I3 900 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 MIR1-1HGQ9H1L0 117 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 PDRG1Q9NUG6 133 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 DDX43Q9NXZ2 648 aaKnown RBP7.72□□□□□ -1.17
SMG6-205ENST00000570659 DPP3Q9NY33 737 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms