RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 NFATC1O95644 943 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 CYP17A1P05093 508 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 MBL2P11226 248 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 CDH8P55286 799 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 AMPD3Q01432 767 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 PSMD6Q15008 389 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 DHCR24Q15392 516 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 ELF2Q15723 593 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 GAB4Q2WGN9 574 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 PLA2G2CQ5R387 149 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 EMC10Q5UCC4 262 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 TDRD10Q5VZ19 366 aaKnown RBP9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 RNF43Q68DV7 783 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 SCARA5Q6ZMJ2 495 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 C12orf40Q86WS4 652 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 GRAMD1CQ8IYS0 662 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 IQUBQ8NA54 791 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 XXYLT1Q8NBI6 393 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 USP33Q8TEY7 942 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 RLN3Q8WXF3 142 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 EXOC4Q96A65 974 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 ACDQ96AP0 544 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZC3H10Q96K80 434 aaKnown RBP9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZNF396Q96N95 335 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 KCNK16Q96T55 309 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 CGRRF1Q99675 332 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 LRRC27Q9C0I9 530 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 GZF1Q9H116 711 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 SMYD3Q9H7B4 428 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 KIAA1586Q9HCI6 787 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 CHORDC1Q9UHD1 332 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 MORC2Q9Y6X9 1032 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 THADAQ6YHU6 1953 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 PTPRDP23468 1912 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 CACNA1EQ15878 2313 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 C4orf47A7E2U8 309 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 TM4SF5O14894 197 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 FOXD2O60548 495 aaPredicted RBP9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 EXOC3O60645 756 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 CUTAO60888 179 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 PPP6R2O75170 966 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 TACC1O75410 805 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 AKAP3O75969 853 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 RHOBTB1O94844 696 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 CAVIN2O95810 425 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 HNRNPLP14866 589 aaKnown RBP eCLIP9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 BCKDHBP21953 392 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 YWHAQP27348 245 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 TIE1P35590 1138 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 PDE6CP51160 858 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 NOP14P78316 857 aaKnown RBP9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 SLC7A9P82251 487 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 KDSRQ06136 332 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 ORC1Q13415 861 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 BIRC3Q13489 604 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 CUL4BQ13620 913 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 ST3GAL2Q16842 350 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 RHBDF2Q6PJF5 856 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 TMEM92Q6UXU6 159 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 UNC13DQ70J99 1090 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 ARMCX6Q7L4S7 300 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 ADGRG2Q8IZP9 1017 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 ALLCQ8N6M5 410 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 NAT16Q8N8M0 369 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 SPRYD3Q8NCJ5 442 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 B3GALNT2Q8NCR0 500 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 MDGA1Q8NFP4 955 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 SCAMP5Q8TAC9 235 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 PLEKHO2Q8TD55 490 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 ERLEC1Q96DZ1 483 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 C8orf48Q96LL4 319 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 C7orf25Q9BPX7 421 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 MED10Q9BTT4 135 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 TTLL2Q9BWV7 592 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 ELOVL4Q9GZR5 314 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 XYLT2Q9H1B5 865 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 CUEDC2Q9H467 287 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 VPS45Q9NRW7 570 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 PCDHGA5Q9Y5G8 931 aa9.16□□□□□ -0.94
CTDNEP1-203ENST00000570385 NUP205Q92621 2012 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 HELZP42694 1942 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 ASCC3Q8N3C0 2202 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 BCLAF3A2AJT9 711 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 PATE3B3GLJ2 98 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 SGK1O00141 431 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 GIPC1O14908 333 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 COCHO43405 550 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 KLF8O95600 359 aaPredicted RBP9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 OAS1P00973 400 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 IRF1P10914 325 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 TCF3P15923 654 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 ME1P48163 572 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 DHPSP49366 369 aaPredicted RBP9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 LIMK1P53667 647 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 EHHADHQ08426 723 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 CRY1Q16526 586 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZNF699Q32M78 642 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 USP39Q53GS9 565 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 LY6G5CQ5SRR4 150 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms