RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 GNSP15586 552 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 NDUFV2P19404 249 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 ACAT1P24752 427 aaKnown RBP11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 WASP42768 502 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 PDIA5Q14554 519 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 INTS6LQ5JSJ4 861 aaKnown RBP11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 DBX2Q6ZNG2 339 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 MIB1Q86YT6 1006 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 GALNT15Q8N3T1 639 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 PDCD7Q8N8D1 485 aaKnown RBP11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 ZNF513Q8N8E2 541 aaPredicted RBP11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 KIAA1958Q8N8K9 716 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 IGSF22Q8N9C0 903 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 LSM14AQ8ND56 463 aaKnown RBP11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 ACBD6Q9BR61 282 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 RNF38Q9H0F5 515 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 PRDM16Q9HAZ2 1276 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 CD248Q9HCU0 757 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 DDX43Q9NXZ2 648 aaKnown RBP11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 GTF3C4Q9UKN8 822 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 A0A0B4J269 797 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 TBC1D3BA6NDS4 549 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 GOLGA8CPA6NN73 597 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 SLC9A3R1O14745 358 aaPredicted RBP11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 HNRNPDLO14979 420 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 NDUFS2O75306 463 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 ZNF883P0CG24 379 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 ADH5P11766 374 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 PFKLP17858 780 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 PDE6CP51160 858 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 NCKAP1LP55160 1127 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 SLC7A9P82251 487 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 TRIM29Q14134 588 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 SV2CQ496J9 727 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 CFAP221Q4G0U5 840 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 SYCP2LQ5T4T6 812 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 SLC39A4Q6P5W5 647 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 TRMT11Q7Z4G4 463 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 SCN4BQ8IWT1 228 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 PDCL2Q8N4E4 241 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 NSUN7Q8NE18 718 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 RHBDD1Q8TEB9 315 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 KCNN1Q92952 543 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 ERLEC1Q96DZ1 483 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 CDC6Q99741 560 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 MSTO1Q9BUK6 570 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 ASB7Q9H672 318 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 GAREM1Q9H706 876 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 TM7SF3Q9NS93 570 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 L1RE1Q9UN81 338 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 FNDC3AQ9Y2H6 1198 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 C2CD2Q9Y426 696 aa11.19□□□□□ -0.62
CTDNEP1-202ENST00000570380 NPHP3-ACAD11A0A0J9YXS1 232 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 A0A1B0GTW7 788 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 HCRTO43612 131 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 JAK2O60674 1132 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 CILPO75339 1184 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 OLFM2O95897 454 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 ADH1CP00326 375 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 PIGRP01833 764 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 NTSR1P30989 418 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 EIF2S3P41091 472 aaKnown RBP11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 ACOT2P49753 483 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 USP46P62068 366 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 BNC1Q01954 994 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 GUCY1B3Q02153 619 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 SMAD1Q15797 465 aaKnown RBP11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 WDR45BQ5MNZ6 344 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 TTC38Q5R3I4 469 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 LY6G5CQ5SRR4 150 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 PCSK4Q6UW60 755 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 OSTM1Q86WC4 334 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 SPATA2LQ8IUW3 424 aaPredicted RBP11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 ETFBKMTQ8IXQ9 262 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 NAT16Q8N8M0 369 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 IPO4Q8TEX9 1081 aaKnown RBP11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 DNASE2BQ8WZ79 361 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 ACOX2Q99424 681 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 MMTAG2Q9BU76 263 aaKnown RBP11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 SLC6A17Q9H1V8 727 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 SMPD4Q9NXE4 827 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 CFAP97Q9P2B7 532 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 BTBD3Q9Y2F9 522 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 CPQQ9Y646 472 aa11.18□□□□□ -0.62
CTDNEP1-202ENST00000570380 ZNF840PA6NDX5 716 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 H0YCG3 227 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 TRIM24O15164 1050 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 EPB41L2O43491 1005 aaKnown RBP11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 TLX3O43711 291 aaPredicted RBP11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 TULP3O75386 442 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 MATKP42679 507 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 MAGEA11P43364 429 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 CFHR1Q03591 330 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 IL17AQ16552 155 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 ME3Q16798 604 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 HLA-BQ31612 363 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 C10orf76Q5T2E6 689 aa11.17□□□□□ -0.62
CTDNEP1-202ENST00000570380 KRT79Q5XKE5 535 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms