RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SMARCD1Q96GM5 515 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 GSDMAQ96QA5 445 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 DUSP9Q99956 384 aaKnown RBP18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 GTPBP4Q9BZE4 634 aaKnown RBP18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 FAM124BQ9H5Z6 455 aaPredicted RBP18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CSNK1G1Q9HCP0 422 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 RBM12Q9NTZ6 932 aaKnown RBP18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 K7ESF4 209 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 HLA-DRAP01903 254 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 DRD1P21728 446 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CNR2P34972 360 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TUBP50607 506 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 GRSF1Q12849 480 aaKnown RBP eCLIP18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 FBXO43Q4G163 708 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 FSTL4Q6MZW2 842 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TSSK4Q6SA08 328 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ELOA2Q8IYF1 753 aaPredicted RBP18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 FUKQ8N0W3 1084 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TTC8Q8TAM2 541 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SH3RF2Q8TEC5 729 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TIGD1Q96MW7 591 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ECT2Q9H8V3 914 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CYP3A43Q9HB55 503 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 GDPD2Q9HCC8 539 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 DMAP1Q9NPF5 467 aaPredicted RBP18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 RMND1Q9NWS8 449 aa18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 DUS2Q9NX74 493 aaKnown RBP18.15■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SPAG17Q6Q759 2223 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 EML5Q05BV3 1969 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CCDC163A0A0D9SF12 145 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CHURC1-FNTBB4DL54 471 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CLDN5O00501 218 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ZDHHC11BP0C7U3 371 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 KRT13P13646 458 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ARSAP15289 507 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 YWHAQP27348 245 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 GJA4P35212 333 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 RAP1GAPP47736 663 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ZXDBP98169 803 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 TAF10Q12962 218 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ADAM9Q13443 819 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 Q6ZS52 159 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 DDX42Q86XP3 938 aaKnown RBP eCLIP18.14■□□□□ 0.492e-6■■■■■ 29.9
MAP1LC3B-208ENST00000570189 ZC3H3Q8IXZ2 948 aaKnown RBP18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 FAM186BQ8IYM0 893 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 GPR161Q8N6U8 529 aaKnown RBP18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 IMPG2Q9BZV3 1241 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 TMEM8AQ9HCN3 771 aa18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SMG5Q9UPR3 1016 aaKnown RBP18.14■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ATG2BQ96BY7 2078 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ATG13O75143 517 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 NFATC1O95644 943 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 PIK3CAP42336 1068 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 IFNAR2P48551 515 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 PPP3CAQ08209 521 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 NR1H3Q13133 447 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SCARA5Q6ZMJ2 495 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 KCNK16Q96T55 309 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 P2RY13Q9BPV8 354 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 RNF38Q9H0F5 515 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 MAPK8IP1Q9UQF2 711 aa18.13■□□□□ 0.49
MAP1LC3B-208ENST00000570189 LEFTY2O00292 366 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 TRIM21P19474 475 aaKnown RBP18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 GCLMP48507 274 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 NDST1P52848 882 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SLC5A3P53794 718 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 PNOCQ13519 176 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ZNF658Q5TYW1 1059 aaPredicted RBP18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 KRT39Q6A163 491 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ACOT1Q86TX2 421 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 LONP2Q86WA8 852 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 TTC39CQ8N584 583 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ZMIZ2Q8NF64 920 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CCDC26Q8TAB7 109 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 TAS1R2Q8TE23 839 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 FBXO32Q969P5 355 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 HNRNPABQ99729 332 aaKnown RBP18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 NIF3L1Q9GZT8 377 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 APOBEC3GQ9HC16 384 aaKnown RBP18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 PNPLA8Q9NP80 782 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 KRT82Q9NSB4 513 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 WNT6Q9Y6F9 365 aa18.12■□□□□ 0.49
MAP1LC3B-208ENST00000570189 MYOFQ9NZM1 2061 aa18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SLC9A3R1O14745 358 aaPredicted RBP18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SLC16A3O15427 465 aaKnown RBP18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 STX10O60499 249 aa18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 AP1G2O75843 785 aa18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 TRIM49P0CI25 452 aa18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 TRIM49CP0CI26 452 aa18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 GALK1P51570 392 aa18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SPOPLQ6IQ16 392 aa18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CD101Q93033 1021 aa18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SECISBP2LQ93073 1101 aaKnown RBP18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SMOQ99835 787 aa18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 FBXO44Q9H4M3 255 aa18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 HMGXB4Q9UGU5 601 aa18.11■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CACNA1AO00555 2505 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CEP250Q9BV73 2442 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 RALGAPA1Q6GYQ0 2036 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 GOLGA6L4A6NEF3 574 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms