RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 COL1A2P08123 1366 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 ESRRAP11474 423 aaPredicted RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 MAGEA9P43362 315 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 GSK3AP49840 483 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 CSNK2BP67870 215 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 ACY1Q03154 408 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 TMEM62Q0P6H9 643 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 CDC16Q13042 620 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 CUL4BQ13620 913 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 SLFN12LQ6IEE8 588 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 MTSS1LQ765P7 747 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 MARK2Q7KZI7 788 aaKnown RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 C17orf53Q8N3J3 647 aaPredicted RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 CNTD1Q8N815 330 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 FSIP1Q8NA03 581 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 ZBTB44Q8NCP5 570 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 TNFRSF25Q93038 417 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 TBATAQ96M53 351 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 RTP3Q9BQQ7 232 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 LSM14BQ9BX40 385 aaKnown RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 PRKD2Q9BZL6 878 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 TMEM117Q9H0C3 514 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 IGFLR1Q9H665 355 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 CBX8Q9HC52 389 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 A1CFQ9NQ94 594 aaKnown RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 PAK6Q9NQU5 681 aaPredicted RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 KIAA1024Q9UPX6 916 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 TMEM5Q9Y2B1 443 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 IKBKBO14920 756 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 STX10O60499 249 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 CCDC192P0DO97 292 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 DGKGP49619 791 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 PSMC5P62195 406 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 CENPCQ03188 943 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 ASPHQ12797 758 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 DMP1Q13316 513 aaPredicted RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 GNA13Q14344 377 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 DCAF17Q5H9S7 520 aaPredicted RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 SYDE1Q6ZW31 735 aaPredicted RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 ZNF410Q86VK4 478 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 FBXO16Q8IX29 292 aaPredicted RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 DIS3L2Q8IYB7 885 aaKnown RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 FAM169BQ8N8A8 192 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 FAM81AQ8TBF8 368 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 MAELQ96JY0 434 aaKnown RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 RIT2Q99578 217 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 RNF26Q9BY78 433 aaPredicted RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 ANO3Q9BYT9 981 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 MAN1C1Q9NR34 630 aa6.97□□□□□ -1.29
SMG1-217ENST00000569764 CPSF3Q9UKF6 684 aaKnown RBP6.97□□□□□ -1.29
SMG1-217ENST00000569764 CNTNAP2Q9UHC6 1331 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 MAPK3P27361 379 aaPredicted RBP6.96□□□□□ -1.29
SMG1-217ENST00000569764 ARFIP1P53367 373 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 CTAG1AP78358 180 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 DR1Q01658 176 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 COASYQ13057 564 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 TIGD6Q17RP2 521 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 INAVAQ3KP66 663 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 CEP55Q53EZ4 464 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 PRR16Q569H4 304 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 MORN1Q5T089 497 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 NXNQ6DKJ4 435 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 MAMDC4Q6UXC1 1216 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 DTHD1Q6ZMT9 781 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 SRGAP1Q7Z6B7 1085 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 PPTC7Q8NI37 304 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 PORCNQ9H237 461 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 SERHL2Q9H4I8 314 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 MMRN2Q9H8L6 949 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 MRPL40Q9NQ50 206 aaKnown RBP6.96□□□□□ -1.29
SMG1-217ENST00000569764 MAD2L2Q9UI95 211 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 CD207Q9UJ71 328 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 ANGPTL2Q9UKU9 493 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 WDR37Q9Y2I8 494 aa6.96□□□□□ -1.29
SMG1-217ENST00000569764 DDX39AO00148 427 aaKnown RBP6.96□□□□□ -1.3
SMG1-217ENST00000569764 LAD1O00515 517 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 ATG13O75143 517 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 YEATS4O95619 227 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 TNNC2P02585 160 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 CYP11A1P05108 521 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 BMP6P22004 513 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 ADH7P40394 386 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 FXR2P51116 673 aaKnown RBP eCLIP6.96□□□□□ -1.31e-7■■■■□ 20.5
SMG1-217ENST00000569764 AP3M2P53677 418 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 PTPN5P54829 565 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 SLC39A14Q15043 492 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 TLR1Q15399 786 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 NR6A1Q15406 480 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 IL17AQ16552 155 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 C15orf59Q2T9L4 293 aaPredicted RBP6.96□□□□□ -1.3
SMG1-217ENST00000569764 ZNF792Q3KQV3 632 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 FSCBQ5H9T9 825 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 ADALQ6DHV7 355 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 NOTUMQ6P988 496 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 SH3RF1Q7Z6J0 888 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 NEK8Q86SG6 692 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 DCP1BQ8IZD4 617 aaKnown RBP6.96□□□□□ -1.3
SMG1-217ENST00000569764 PDCD7Q8N8D1 485 aaKnown RBP6.96□□□□□ -1.3
SMG1-217ENST00000569764 SMC6Q96SB8 1091 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 BCO2Q9BYV7 579 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms