RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 CDKL5O76039 1030 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 PRPF6O94906 941 aaKnown RBP8.71□□□□□ -1.02
CCDC113-205ENST00000569374 LARGE1O95461 756 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 TIMP1P01033 207 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 PROCP04070 461 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 MPOP05164 745 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 CLEC2LP0C7M8 214 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 OSMP13725 252 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 MYOGP15173 224 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 AOAHP28039 575 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 EVCP57679 992 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 SP2Q02086 613 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 DBPQ10586 325 aaPredicted RBP8.71□□□□□ -1.02
CCDC113-205ENST00000569374 TRDNQ13061 729 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 PPP2R5BQ15173 497 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 ANO4Q32M45 955 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 GLIPR1L2Q4G1C9 344 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 PRSS36Q5K4E3 855 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 PRAMEF9Q5VWM5 478 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 MBNL2Q5VZF2 373 aaKnown RBP8.71□□□□□ -1.02
CCDC113-205ENST00000569374 KIAA1841Q6NSI8 718 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 CPLX2Q6PUV4 134 aaKnown RBP8.71□□□□□ -1.02
CCDC113-205ENST00000569374 KCNK18Q7Z418 384 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.71□□□□□ -1.02
CCDC113-205ENST00000569374 TMCO2Q7Z6W1 182 aaPredicted RBP8.71□□□□□ -1.02
CCDC113-205ENST00000569374 RTN4RL1Q86UN2 441 aaPredicted RBP8.71□□□□□ -1.02
CCDC113-205ENST00000569374 NECAB1Q8N987 351 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 USP38Q8NB14 1042 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 NUP133Q8WUM0 1156 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 AFG1LQ8WV93 481 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 KAT2BQ92831 832 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 FOXRED1Q96CU9 486 aaPredicted RBP8.71□□□□□ -1.02
CCDC113-205ENST00000569374 MAP7D2Q96T17 732 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 NGRNQ9NPE2 291 aaKnown RBP8.71□□□□□ -1.02
CCDC113-205ENST00000569374 PRDM7Q9NQW5 492 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 PXMP2Q9NR77 195 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 EDARQ9UNE0 448 aa8.71□□□□□ -1.02
CCDC113-205ENST00000569374 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 ANO9A1A5B4 782 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 ZC3H12DA2A288 527 aaKnown RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 ZBTB5O15062 677 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 RRP9O43818 475 aaKnown RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 NDUFS2O75306 463 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 MMP3P08254 477 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 TXNP10599 105 aaKnown RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 HSD17B4P51659 736 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 ZNF200P98182 395 aaPredicted RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 ADCY2Q08462 1091 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 SPIDRQ14159 915 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 WTAPQ15007 396 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 SAFBQ15424 915 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 PITRM1Q5JRX3 1037 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 SLFN12LQ6IEE8 588 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 ZNF365Q70YC5 407 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 RALYLQ86SE5 291 aaKnown RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 DTX1Q86Y01 620 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 SRBD1Q8N5C6 995 aaKnown RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 PCSK9Q8NBP7 692 aaKnown RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 NCOA7Q8NI08 942 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 TIFAQ96CG3 184 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 TSPAN17Q96FV3 270 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 TOE1Q96GM8 510 aaKnown RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 TOX2Q96NM4 488 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 RMDN3Q96TC7 470 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 MAP3K14Q99558 947 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 CDX2Q99626 313 aaPredicted RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 FUCA2Q9BTY2 467 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 NAT10Q9H0A0 1025 aaKnown RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 HIPK3Q9H422 1215 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 FAM204AQ9H8W3 233 aa8.7□□□□□ -1.02
CCDC113-205ENST00000569374 YBX2Q9Y2T7 364 aaKnown RBP8.7□□□□□ -1.02
CCDC113-205ENST00000569374 COL4A6Q14031 1691 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 PRSS38A1L453 326 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 ADCY5O95622 1261 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 PRLP01236 227 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 MYCLP12524 364 aaPredicted RBP8.69□□□□□ -1.02
CCDC113-205ENST00000569374 C5AR1P21730 350 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 UBA1P22314 1058 aaKnown RBP8.69□□□□□ -1.02
CCDC113-205ENST00000569374 RABGGTBP53611 331 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 ERVFRD-1P60508 538 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 SLC6A3Q01959 620 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 GRM3Q14832 879 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 GPNMBQ14956 572 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 PLCL1Q15111 1095 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 PGM5Q15124 567 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 ZRSR1Q15695 479 aaKnown RBP8.69□□□□□ -1.02
CCDC113-205ENST00000569374 UBE2SQ16763 222 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 MUM1Q2TAK8 710 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 ATAT1Q5SQI0 421 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 MFSD5Q6N075 450 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 USP17L6PQ6QN14 398 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 CCDC73Q6ZRK6 1079 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 RBM43Q6ZSC3 357 aaKnown RBP8.69□□□□□ -1.02
CCDC113-205ENST00000569374 OTOP2Q7RTS6 562 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 SRGAP1Q7Z6B7 1085 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 CATIPQ7Z7H3 387 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 BICD2Q8TD16 824 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 PGBD1Q96JS3 809 aa8.69□□□□□ -1.02
CCDC113-205ENST00000569374 FAM193BQ96PV7 902 aaPredicted RBP8.69□□□□□ -1.02
CCDC113-205ENST00000569374 TAAR9Q96RI9 348 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms