RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PSMC2P35998 433 aaKnown RBP8.31□□□□□ -1.08
CDH3-209ENST00000569080 PGFP49763 221 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 KPNA1P52294 538 aaPredicted RBP8.31□□□□□ -1.08
CDH3-209ENST00000569080 NDST1P52848 882 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 SLC5A3P53794 718 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 SLC7A9P82251 487 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 SATB1Q01826 763 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 TAF10Q12962 218 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 ADAM9Q13443 819 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 RUNX3Q13761 415 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 PON2Q15165 354 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 PDGFRLQ15198 375 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 EML3Q32P44 896 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 CBWD6Q4V339 395 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 TMEM196Q5HYL7 178 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 CBWD3Q5JTY5 395 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 CBWD5Q5RIA9 395 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 FSTL4Q6MZW2 842 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 PKN3Q6P5Z2 889 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 ZC3H14Q6PJT7 736 aaKnown RBP8.31□□□□□ -1.08
CDH3-209ENST00000569080 ACOT1Q86TX2 421 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 UNC93AQ86WB7 457 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 ELOA2Q8IYF1 753 aaPredicted RBP8.31□□□□□ -1.08
CDH3-209ENST00000569080 ADSSL1Q8N142 457 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 SCAMP5Q8TAC9 235 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 SH3RF2Q8TEC5 729 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 WHAMMQ8TF30 809 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 OSCP1Q8WVF1 389 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 EZH1Q92800 747 aaPredicted RBP8.31□□□□□ -1.08
CDH3-209ENST00000569080 SMARCD1Q96GM5 515 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 TNIP3Q96KP6 325 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 SMOQ99835 787 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 NIF3L1Q9GZT8 377 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 RNF38Q9H0F5 515 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 SEMA4AQ9H3S1 761 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 LMAN1LQ9HAT1 526 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 TMEM8AQ9HCN3 771 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 DMAP1Q9NPF5 467 aaPredicted RBP8.31□□□□□ -1.08
CDH3-209ENST00000569080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDH3-209ENST00000569080 RMND1Q9NWS8 449 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 THG1LQ9NWX6 298 aaKnown RBP8.31□□□□□ -1.08
CDH3-209ENST00000569080 ZSCAN32Q9NX65 697 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 WNT6Q9Y6F9 365 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 MYH10P35580 1976 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 EML5Q05BV3 1969 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 CEP250Q9BV73 2442 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 HHLA1C9JL84 531 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 TRDMT1O14717 391 aaKnown RBP8.3□□□□□ -1.08
CDH3-209ENST00000569080 SLC16A3O15427 465 aaKnown RBP8.3□□□□□ -1.08
CDH3-209ENST00000569080 GADD45BO75293 160 aaPredicted RBP8.3□□□□□ -1.08
CDH3-209ENST00000569080 CILPO75339 1184 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 AP1G2O75843 785 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 LMNAP02545 664 aaKnown RBP8.3□□□□□ -1.08
CDH3-209ENST00000569080 KRT13P13646 458 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 P4HA1P13674 534 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 CD44P16070 742 aaKnown RBP8.3□□□□□ -1.08
CDH3-209ENST00000569080 HDCP19113 662 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 GJA4P35212 333 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 PPP3CCP48454 512 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 MXI1P50539 228 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 CCR3P51677 355 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 CSTF1Q05048 431 aaKnown RBP8.3□□□□□ -1.08
CDH3-209ENST00000569080 DMWDQ09019 674 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 LRRC32Q14392 662 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 SNX30Q5VWJ9 437 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 KRT39Q6A163 491 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 ANKRD40Q6AI12 368 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 CLEC20AQ6ZU45 233 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 GPRIN1Q7Z2K8 1008 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 NUP93Q8N1F7 819 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 SPEM1Q8N4L4 309 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 KIAA1958Q8N8K9 716 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 C12orf29Q8N999 325 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 SLC2A14Q8TDB8 520 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 OVCA2Q8WZ82 227 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 ARID3AQ99856 593 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 FAM126AQ9BYI3 521 aaPredicted RBP8.3□□□□□ -1.08
CDH3-209ENST00000569080 EPC1Q9H2F5 836 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 ECT2Q9H8V3 914 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 CYP3A43Q9HB55 503 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 FBRSL1Q9HCM7 1045 aaKnown RBP8.3□□□□□ -1.08
CDH3-209ENST00000569080 FAM49BQ9NUQ9 324 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 EHD2Q9NZN4 543 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 TRPM5Q9NZQ8 1165 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 MAN1B1Q9UKM7 699 aa8.3□□□□□ -1.08
CDH3-209ENST00000569080 ATP8B3O60423 1300 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 LEFTY2O00292 366 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 CETN3O15182 167 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 COCHO43405 550 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 KINO60870 393 aaKnown RBP8.29□□□□□ -1.08
CDH3-209ENST00000569080 RTN3O95197 1032 aaPredicted RBP8.29□□□□□ -1.08
CDH3-209ENST00000569080 EPB41P11171 864 aaKnown RBP8.29□□□□□ -1.08
CDH3-209ENST00000569080 TUBP50607 506 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 PDE6CP51160 858 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 LRRC63Q05C16 580 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 IFRD2Q12894 506 aaPredicted RBP8.29□□□□□ -1.08
CDH3-209ENST00000569080 DGKKQ5KSL6 1271 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 TTI2Q6NXR4 508 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 SYNPOQ8N3V7 929 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 CPA6Q8N4T0 437 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms