RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 CD59P13987 128 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 ADSSP30520 456 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 MESP2Q0VG99 397 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 SCAPQ12770 1279 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 RESTQ13127 1097 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 SLC14A1Q13336 389 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
SNX29-207ENST00000568949 DHX8Q14562 1220 aaKnown RBP13.34□□□□□ -0.27
SNX29-207ENST00000568949 CCDC142Q17RM4 750 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 EMC10Q5UCC4 262 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 RHBDF2Q6PJF5 856 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 DENND5BQ6ZUT9 1274 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 SFTPA1Q8IWL2 248 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 ADGRF2Q8IZF7 708 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 MINDY1Q8N5J2 469 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 CXorf38Q8TB03 319 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 TTLL2Q9BWV7 592 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 FSCN3Q9NQT6 498 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 ARHGEF4Q9NR80 690 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 PPP4R2Q9NY27 417 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 MAGEC2Q9UBF1 373 aaPredicted RBP13.34□□□□□ -0.27
SNX29-207ENST00000568949 ITGA11Q9UKX5 1188 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 SNX9Q9Y5X1 595 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 ZNF840PA6NDX5 716 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 ADH5P11766 374 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 UBA7P41226 1012 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 WNT7BP56706 349 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 RBP5P82980 135 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 RPL6Q02878 288 aaKnown RBP13.33□□□□□ -0.28
SNX29-207ENST00000568949 ZNF33AQ06730 810 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 MCM6Q14566 821 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 MAPRE1Q15691 268 aaKnown RBP13.33□□□□□ -0.28
SNX29-207ENST00000568949 SOWAHAQ2M3V2 549 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 C19orf48Q6RUI8 117 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 DPH6Q7L8W6 267 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 ZNF720Q7Z2F6 126 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 TRMT11Q7Z4G4 463 aaKnown RBP13.33□□□□□ -0.28
SNX29-207ENST00000568949 C12orf40Q86WS4 652 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 DDX42Q86XP3 938 aaKnown RBP eCLIP13.33□□□□□ -0.28
SNX29-207ENST00000568949 BRSK2Q8IWQ3 736 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 CSGALNACT2Q8N6G5 542 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 ADAMTS14Q8WXS8 1223 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 RAD54LQ92698 747 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 RNF38Q9H0F5 515 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 TBC1D14Q9P2M4 693 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 CDH9Q9ULB4 789 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 CPQQ9Y646 472 aa13.33□□□□□ -0.28
SNX29-207ENST00000568949 A0A1W2PQD8 194 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 PPP1R37O75864 691 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 SEC24BO95487 1268 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 OAS1P00973 400 aaKnown RBP13.32□□□□□ -0.28
SNX29-207ENST00000568949 GABRG2P18507 467 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 PLCG1P19174 1290 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 ANXA13P27216 316 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 GRIK1P39086 918 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 USP46P62068 366 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 NOP14P78316 857 aaKnown RBP13.32□□□□□ -0.28
SNX29-207ENST00000568949 TRIP6Q15654 476 aaKnown RBP13.32□□□□□ -0.28
SNX29-207ENST00000568949 PREPLQ4J6C6 727 aaPredicted RBP13.32□□□□□ -0.28
SNX29-207ENST00000568949 CCNI2Q6ZMN8 369 aaPredicted RBP13.32□□□□□ -0.28
SNX29-207ENST00000568949 LIMS2Q7Z4I7 341 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 PHTF2Q8N3S3 785 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 SYT15Q9BQS2 421 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 FAM213AQ9BRX8 229 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 CCDC86Q9H6F5 360 aaKnown RBP13.32□□□□□ -0.28
SNX29-207ENST00000568949 EXOC7Q9UPT5 735 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 PLXNB3Q9ULL4 1909 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 ITPR1Q14643 2758 aa13.32□□□□□ -0.28
SNX29-207ENST00000568949 IGSF10Q6WRI0 2623 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 ASXL3Q9C0F0 2248 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 URB1O60287 2271 aaKnown RBP13.31□□□□□ -0.28
SNX29-207ENST00000568949 TRIM66O15016 1216 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 HCRTO43612 131 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 SH3BP5O60239 455 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 ATP2C2O75185 946 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 ZNF217O75362 1048 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 GJB3O75712 270 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 LDHAP00338 332 aaKnown RBP13.31□□□□□ -0.28
SNX29-207ENST00000568949 KRT19P08727 400 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 FTH1P19P0C7X4 201 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 BDNFP23560 247 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 GAD2Q05329 585 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 KDSRQ06136 332 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 COL28A1Q2UY09 1125 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 MCTP1Q6DN14 999 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 KRI1Q8N9T8 703 aaKnown RBP13.31□□□□□ -0.28
SNX29-207ENST00000568949 MYLPFQ96A32 169 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 OTUB2Q96DC9 234 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 C8orf48Q96LL4 319 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 STRA6Q9BX79 667 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 IKZF4Q9H2S9 585 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 FAM124BQ9H5Z6 455 aaPredicted RBP13.31□□□□□ -0.28
SNX29-207ENST00000568949 ZDHHC4Q9NPG8 344 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 CRTAC1Q9NQ79 661 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 SMPD4Q9NXE4 827 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 RBAKQ9NYW8 714 aaPredicted RBP13.31□□□□□ -0.28
SNX29-207ENST00000568949 CALCOCO1Q9P1Z2 691 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 CFAP97Q9P2B7 532 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 SIX4Q9UIU6 781 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 KIF3AQ9Y496 699 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms