RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 TMEM59LQ9UK28 342 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 USP18Q9UMW8 372 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 SMG5Q9UPR3 1016 aaKnown RBP6.29□□□□□ -1.4
CDH13-211ENST00000568770 PIN4Q9Y237 131 aaKnown RBP6.29□□□□□ -1.4
CDH13-211ENST00000568770 FAN1Q9Y2M0 1017 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 TRIP11Q15643 1979 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 ITPR1Q14643 2758 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 DMXL2Q8TDJ6 3036 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 A0A087WZ62 844 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 AGRPO00253 132 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 NRP1O14786 923 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 TGM5O43548 720 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 DLX3O60479 287 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 ZNF623O75123 536 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 POMCP01189 267 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 URODP06132 367 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 THBDP07204 575 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 CD72P21854 359 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 SFPQP23246 707 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDH13-211ENST00000568770 MCM5P33992 734 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 ECI1P42126 302 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 RAB27AP51159 221 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 GFRA1P56159 465 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 PRKCEQ02156 737 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 KIR3DS1Q14943 382 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 UBXN2BQ14CS0 331 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 UGCGQ16739 394 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 FAM209AQ5JX71 171 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 JAKMIP3Q5VZ66 844 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 PARM1Q6UWI2 310 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 CBLL1Q75N03 491 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 JAZF1Q86VZ6 243 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 TEX2Q8IWB9 1127 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 TMTC2Q8N394 836 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 TMEM145Q8NBT3 493 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 FRS2Q8WU20 508 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 CRYGNQ8WXF5 182 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 NELL1Q92832 810 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 FGF14Q92915 247 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 PHKBQ93100 1093 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 PGBD4Q96DM1 585 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 C1orf159Q96HA4 380 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 B3GALT6Q96L58 329 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 FAM193BQ96PV7 902 aaPredicted RBP6.28□□□□□ -1.4
CDH13-211ENST00000568770 FDXACB1Q9BRP7 624 aaPredicted RBP6.28□□□□□ -1.4
CDH13-211ENST00000568770 TMEM175Q9BSA9 504 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 DDX23Q9BUQ8 820 aaKnown RBP6.28□□□□□ -1.4
CDH13-211ENST00000568770 NRBP2Q9NSY0 501 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 MARCH5Q9NX47 278 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 ZSCAN32Q9NX65 697 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 ADGRE2Q9UHX3 823 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 CTNND2Q9UQB3 1225 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 SSX2IPQ9Y2D8 614 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 PCDHB2Q9Y5E7 798 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 BACE2Q9Y5Z0 518 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 SETXQ7Z333 2677 aaKnown RBP6.28□□□□□ -1.4
CDH13-211ENST00000568770 GCN1Q92616 2671 aaKnown RBP6.28□□□□□ -1.4
CDH13-211ENST00000568770 ZFYVE26Q68DK2 2539 aa6.28□□□□□ -1.4
CDH13-211ENST00000568770 KIF26AQ9ULI4 1882 aaPredicted RBP6.28□□□□□ -1.4
CDH13-211ENST00000568770 TMEM150BA6NC51 233 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 FADS2P1A8MWK0 482 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 PRODHO43272 600 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 PAPLNO95428 1278 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 IGHDP01880 384 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 SNRPB2P08579 225 aaKnown RBP6.27□□□□□ -1.41
CDH13-211ENST00000568770 CYP3A4P08684 503 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 GSPT1P15170 499 aaKnown RBP6.27□□□□□ -1.41
CDH13-211ENST00000568770 HOXC12P31275 282 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 L1CAMP32004 1257 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 LIFRP42702 1097 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 GLUD2P49448 558 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 CDC42EP1Q00587 391 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 SETQ01105 290 aaPredicted RBP6.27□□□□□ -1.41
CDH13-211ENST00000568770 SQSTM1Q13501 440 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 HSP90AA2PQ14568 343 aaPredicted RBP6.27□□□□□ -1.41
CDH13-211ENST00000568770 MLF2Q15773 248 aaPredicted RBP6.27□□□□□ -1.41
CDH13-211ENST00000568770 SLC44A4Q53GD3 710 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 PRR16Q569H4 304 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 ZBTB41Q5SVQ8 909 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 FYB2Q5VWT5 728 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 CATSPER4Q7RTX7 472 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 MRPL10Q7Z7H8 261 aaKnown RBP6.27□□□□□ -1.41
CDH13-211ENST00000568770 MICU3Q86XE3 530 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 RHPN2Q8IUC4 686 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 KSR1Q8IVT5 923 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 RNF168Q8IYW5 571 aaPredicted RBP6.27□□□□□ -1.41
CDH13-211ENST00000568770 HDAC7Q8WUI4 952 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 RUFY2Q8WXA3 655 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 MAP4K1Q92918 833 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 MAP6Q96JE9 813 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 EXOC2Q96KP1 924 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 PTCHD1Q96NR3 888 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 SH2D3AQ9BRG2 576 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 MTA3Q9BTC8 594 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 AARSD1Q9BTE6 412 aaKnown RBP6.27□□□□□ -1.41
CDH13-211ENST00000568770 HERC2P3Q9BVR0 1158 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 LRRC2Q9BYS8 371 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 OSBPL6Q9BZF3 934 aa6.27□□□□□ -1.41
CDH13-211ENST00000568770 RWDD1Q9H446 243 aaPredicted RBP6.27□□□□□ -1.41
CDH13-211ENST00000568770 PLEKHA4Q9H4M7 779 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms