RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	APEX2	Q9UBZ4	518 aa		17.54	■□□□□ 0.4
INO80E-210	ENST00000567705	KIAA1257	Q9ULG3	409 aa		17.54	■□□□□ 0.4
INO80E-210	ENST00000567705	USP3	Q9Y6I4	520 aa		17.54	■□□□□ 0.4
INO80E-210	ENST00000567705	SHISA7	A6NL88	538 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705		O00370	1275 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	RTN3	O95197	1032 aa	Predicted RBP	17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	TCF3	P15923	654 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	PFKL	P17858	780 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	ADORA2B	P29275	332 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	MAP3K7CL	P57077	242 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	TAF10	Q12962	218 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	ZNF268	Q14587	947 aa	Predicted RBP	17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	TAF12	Q16514	161 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	TPD52L1	Q16890	204 aa	Predicted RBP	17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	EXOC3L4	Q17RC7	722 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	ARHGAP15	Q53QZ3	475 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	RAB41	Q5JT25	222 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	IER5L	Q5T953	404 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	ENOSF1	Q7L5Y1	443 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	ANKRD52	Q8NB46	1076 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	E2F7	Q96AV8	911 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	MED10	Q9BTT4	135 aa		17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	LIMA1	Q9UHB6	759 aa	Known RBP	17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	AJAP1	Q9UKB5	411 aa	Predicted RBP	17.53	■□□□□ 0.4
INO80E-210	ENST00000567705	ZDBF2	Q9HCK1	2354 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	KRBA1	A5PL33	1030 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	C2orf78	A6NCI8	922 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	HEPACAM2	A8MVW5	462 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	BECN2	A8MW95	431 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	OAS1	P00973	400 aa	Known RBP	17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	VDR	P11473	427 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	PSMC3	P17980	439 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	PTMS	P20962	102 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	PGF	P49763	221 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	KIF11	P52732	1056 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	ZXDB	P98169	803 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	KRT31	Q15323	416 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	GJB7	Q6PEY0	223 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	TMEM270	Q6UE05	265 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	LCLAT1	Q6UWP7	414 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	DHX40	Q8IX18	779 aa	Known RBP	17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	MAB21L3	Q8N8X9	362 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	DEPDC1B	Q8WUY9	529 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	SHC3	Q92529	594 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	MRPS31	Q92665	395 aa	Known RBP	17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	USP13	Q92995	863 aa	Predicted RBP	17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	NAA15	Q9BXJ9	866 aa	Known RBP	17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	CCL26	Q9Y258	94 aa		17.52	■□□□□ 0.4
INO80E-210	ENST00000567705	DMD	P11532	3685 aa		17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	TRIM21	P19474	475 aa	Known RBP	17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	YWHAQ	P27348	245 aa		17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	ANO6	Q4KMQ2	910 aa		17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	FAM81B	Q96LP2	452 aa		17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	GCNA	Q96QF7	691 aa		17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	CYP2S1	Q96SQ9	504 aa		17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	DDX23	Q9BUQ8	820 aa	Known RBP	17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	SLITRK6	Q9H5Y7	841 aa		17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	UBE2T	Q9NPD8	197 aa	Predicted RBP	17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	TSPAN16	Q9UKR8	245 aa		17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	SCML2	Q9UQR0	700 aa		17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	ZNF318	Q5VUA4	2279 aa		17.51	■□□□□ 0.39
INO80E-210	ENST00000567705	TULP2	O00295	520 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	LETM1	O95202	739 aa	Predicted RBP	17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	PDGFB	P01127	241 aa	Predicted RBP	17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	RPL34	P49207	117 aa	Known RBP	17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	TUB	P50607	506 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	SLC7A9	P82251	487 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	IQCB1	Q15051	598 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	CNGA2	Q16280	664 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	MEA1	Q16626	185 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	SGO2	Q562F6	1265 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	BHLHA9	Q7RTU4	235 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	RBBP8NL	Q8NC74	664 aa	Predicted RBP	17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	PDZD8	Q8NEN9	1154 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	DNASE1L2	Q92874	299 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	PRRX2	Q99811	253 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	DNAI2	Q9GZS0	605 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	RNF38	Q9H0F5	515 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	SMG9	Q9H0W8	520 aa	Known RBP	17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	TDP1	Q9NUW8	608 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	TRPM5	Q9NZQ8	1165 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	PCDHB4	Q9Y5E5	795 aa		17.5	■□□□□ 0.39
INO80E-210	ENST00000567705	CHAD	O15335	359 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	GABBR2	O75899	941 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	CFH	P08603	1231 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	AVPR2	P30518	371 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	PLA2G4A	P47712	749 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	VCP	P55072	806 aa	Known RBP	17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	MFAP3	P55082	362 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	STARD6	P59095	220 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	USP4	Q13107	963 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	ZNF77	Q15935	545 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	KLHDC7A	Q5VTJ3	777 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	CWF19L1	Q69YN2	538 aa	Known RBP	17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	CCDC186	Q7Z3E2	898 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	PIGZ	Q86VD9	579 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	CREBRF	Q8IUR6	639 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	ZNF276	Q8N554	614 aa		17.49	■□□□□ 0.39
INO80E-210	ENST00000567705	CELF5	Q8N6W0	485 aa	Known RBP	17.49	■□□□□ 0.39

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms