RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 RIN3Q8TB24 985 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 TMEM40Q8WWA1 233 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 SHC3Q92529 594 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 ARHGEF26Q96DR7 871 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 PSMG3-AS1Q96PY0 264 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 PCDHB18PQ96TA0 734 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 JPH2Q9BR39 696 aaPredicted RBP6.15□□□□□ -1.42
SF3B3-210ENST00000567654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.15□□□□□ -1.42
SF3B3-210ENST00000567654 CARD6Q9BX69 1037 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 NT5C1AQ9BXI3 368 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 NFKBIZQ9BYH8 718 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 MTMR12Q9C0I1 747 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 TGIF2Q9GZN2 237 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 FAM49AQ9H0Q0 323 aaPredicted RBP6.15□□□□□ -1.42
SF3B3-210ENST00000567654 ADAMTS10Q9H324 1103 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 LRRC4CQ9HCJ2 640 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 IGSF5Q9NSI5 407 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 KCNG1Q9UIX4 513 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 NOCTQ9UK39 431 aaKnown RBP6.15□□□□□ -1.42
SF3B3-210ENST00000567654 NUB1Q9Y5A7 615 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 MRFAP1Q9Y605 127 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 U3KQE9 123 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 PATJQ8NI35 1801 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 FNDC1Q4ZHG4 1894 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 MYO16Q9Y6X6 1858 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 MBLAC1A4D2B0 266 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 TMCO5BA8MYB1 307 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 CHURC1-FNTBB4DL54 471 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 KIAA0391O15091 583 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 MAGEB2O15479 319 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 ASAP2O43150 1006 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 CYP26A1O43174 497 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 SRGAP2O75044 1071 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 ADAMTS4O75173 837 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 TADA3O75528 432 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 SLU7O95391 586 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 LDHAP00338 332 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 PGK1P00558 417 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 CYP2C9P11712 490 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 AKR1A1P14550 325 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 TNNI1P19237 187 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 ACO1P21399 889 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 SCP2P22307 547 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 HOXC8P31273 242 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 GTF2H1P32780 548 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 ABCD1P33897 745 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 PIK3CAP42336 1068 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 GUCY2FP51841 1108 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 GJA9P57773 515 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 PURAQ00577 322 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 FMO1Q01740 532 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 POU5F1BQ06416 359 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 CACNB2Q08289 660 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 NCBP1Q09161 790 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 KIF5AQ12840 1032 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 NOGQ13253 232 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 SPA17Q15506 151 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 NAB2Q15742 525 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 FSCN1Q16658 493 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 KIZQ2M2Z5 673 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 DEFB115Q30KQ5 88 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 TAF3Q5VWG9 929 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 CCDC81Q6ZN84 652 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 TRAPPC11Q7Z392 1133 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 EXOC8Q8IYI6 725 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 FAM71AQ8IYT1 594 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 RPUSD2Q8IZ73 545 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 UBR7Q8N806 425 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 CD99L2Q8TCZ2 262 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 U2AF1L4Q8WU68 220 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 DNAJB3Q8WWF6 145 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 DDX1Q92499 740 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 SECISBP2LQ93073 1101 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 NT5C1BQ96P26 610 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 FNBP1Q96RU3 617 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 NAPGQ99747 312 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 MIPEPQ99797 713 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 AGPAT1Q99943 283 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 TCHPQ9BT92 498 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 DUSP23Q9BVJ7 150 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 OSBPL1AQ9BXW6 950 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 LRRC3Q9BY71 257 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 FOXQ1Q9C009 403 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 UPF3AQ9H1J1 476 aaKnown RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 EPC1Q9H2F5 836 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 GOLPH3Q9H4A6 298 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 CCSER2Q9H7U1 834 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 KIAA1586Q9HCI6 787 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 PRMT7Q9NVM4 692 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-210ENST00000567654 TNFSF13BQ9Y275 285 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 VWA8A3KMH1 1905 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 PTPRSQ13332 1948 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 MICAL3Q7RTP6 2002 aa6.14□□□□□ -1.43
SF3B3-210ENST00000567654 SMIM35A0A1B0GVV1 85 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 GRID2IPA4D2P6 1211 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 RRN3P2A6NIE6 340 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 PRR19A6NJB7 356 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 LACTBL1A8MY62 500 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 ZNF185O15231 689 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 KRT86O43790 486 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms