RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CUL4BQ13620 913 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 PLK5Q496M5 336 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 C11orf74Q86VG3 221 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 CEP57L1Q8IYX8 460 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 C12orf50Q8NA57 414 aaPredicted RBP15.95■□□□□ 0.14
RNF40-209ENST00000566703 PARD3BQ8TEW8 1205 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 USP33Q8TEY7 942 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 TNIP3Q96KP6 325 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 TBC1D14Q9P2M4 693 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 OBSL1O75147 1896 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 ATP8B3O60423 1300 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 A0A0A0MRY4 1105 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 K7EQS6 105 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 TM4SF5O14894 197 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 GDF9O60383 454 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 C4BPAP04003 597 aaKnown RBP15.94■□□□□ 0.14
RNF40-209ENST00000566703 CASP1P29466 404 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 EIF2DP41214 584 aaKnown RBP15.94■□□□□ 0.14
RNF40-209ENST00000566703 MRPS21P82921 87 aaKnown RBP15.94■□□□□ 0.14
RNF40-209ENST00000566703 ELF2Q15723 593 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 HSF5Q4G112 596 aaPredicted RBP15.94■□□□□ 0.14
RNF40-209ENST00000566703 AASDHQ4L235 1098 aaPredicted RBP15.94■□□□□ 0.14
RNF40-209ENST00000566703 ZNF667Q5HYK9 610 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 PPM1JQ5JR12 505 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 FOXD4L5Q5VV16 416 aaPredicted RBP15.94■□□□□ 0.14
RNF40-209ENST00000566703 SNX30Q5VWJ9 437 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 IL31Q6EBC2 164 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 FOXD4L4Q8WXT5 416 aaPredicted RBP15.94■□□□□ 0.14
RNF40-209ENST00000566703 HHIPQ96QV1 700 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 DUSP9Q99956 384 aaKnown RBP15.94■□□□□ 0.14
RNF40-209ENST00000566703 ZNF518BQ9C0D4 1074 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 DPEP3Q9H4B8 488 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 VPS45Q9NRW7 570 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 IL37Q9NZH6 218 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 USP25Q9UHP3 1055 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 CPQQ9Y646 472 aa15.94■□□□□ 0.14
RNF40-209ENST00000566703 E2F8A0AVK6 867 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 CLDN5O00501 218 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 KLRC4O43908 158 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 ABL1P00519 1130 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 RPN1P04843 607 aaKnown RBP15.93■□□□□ 0.14
RNF40-209ENST00000566703 MYL1P05976 194 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 HSP90AA1P07900 732 aaKnown RBP15.93■□□□□ 0.14
RNF40-209ENST00000566703 P4HA1P13674 534 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 CACNA2D1P54289 1103 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 BIRC3Q13489 604 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 NCOA4Q13772 614 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 DHCR24Q15392 516 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 GAB4Q2WGN9 574 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 USP39Q53GS9 565 aaKnown RBP15.93■□□□□ 0.14
RNF40-209ENST00000566703 FILIP1Q7Z7B0 1213 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 HSCBQ8IWL3 235 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 PLEKHO2Q8TD55 490 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 TMC2Q8TDI7 906 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 OTUB2Q96DC9 234 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 DUSP15Q9H1R2 295 aaPredicted RBP15.93■□□□□ 0.14
RNF40-209ENST00000566703 TMEM30AQ9NV96 361 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 POLR3BQ9NW08 1133 aaPredicted RBP15.93■□□□□ 0.14
RNF40-209ENST00000566703 SERTAD1Q9UHV2 236 aa15.93■□□□□ 0.14
RNF40-209ENST00000566703 ANAPC1Q9H1A4 1944 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 LRRIQ3A6PVS8 624 aaPredicted RBP15.92■□□□□ 0.14
RNF40-209ENST00000566703 PDXKO00764 312 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 CYP17A1P05093 508 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 MPLP40238 635 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 CASP4P49662 377 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 TUBP50607 506 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 DGKEP52429 567 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 CDH8P55286 799 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 STK4Q13043 487 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 SF3A2Q15428 464 aaKnown RBP15.92■□□□□ 0.14
RNF40-209ENST00000566703 SGSM1Q2NKQ1 1148 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 ZNF699Q32M78 642 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 HECTD3Q5T447 861 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 RHBDF2Q6PJF5 856 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 PAQR9Q6ZVX9 377 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 RASSF3Q86WH2 238 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 CRYBG2Q8N1P7 616 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 TSTD1Q8NFU3 115 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 TAF4BQ92750 862 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 FBXO32Q969P5 355 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 PAGE5Q96GU1 130 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 PNKPQ96T60 521 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 DMAP1Q9NPF5 467 aaPredicted RBP15.92■□□□□ 0.14
RNF40-209ENST00000566703 MMP17Q9ULZ9 603 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 GREB1Q4ZG55 1949 aa15.92■□□□□ 0.14
RNF40-209ENST00000566703 FAM92AA1XBS5 289 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.91■□□□□ 0.14
RNF40-209ENST00000566703 TNFRSF10BO14763 440 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 IKBKBO14920 756 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 ACTN4O43707 911 aaKnown RBP15.91■□□□□ 0.14
RNF40-209ENST00000566703 ADH1CP00326 375 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 MBL2P11226 248 aaPredicted RBP15.91■□□□□ 0.14
RNF40-209ENST00000566703 TNFRSF4P43489 277 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 CRY1Q16526 586 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 FOXD4L6Q3SYB3 417 aaPredicted RBP15.91■□□□□ 0.14
RNF40-209ENST00000566703 ZACNQ401N2 412 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 PREPLQ4J6C6 727 aaPredicted RBP15.91■□□□□ 0.14
RNF40-209ENST00000566703 FOXD4L3Q6VB84 417 aaPredicted RBP15.91■□□□□ 0.14
RNF40-209ENST00000566703 FAM35AQ86V20 835 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 UNC93AQ86WB7 457 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms