RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 PTK2Q05397 1052 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 TAF10Q12962 218 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 DRAP1Q14919 205 aaPredicted RBP27.6■■■□□ 2.01
NME3-209ENST00000566600 PTPN21Q16825 1174 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 FAM78AQ5JUQ0 283 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 MON1AQ86VX9 555 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 TTC30AQ86WT1 665 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 SCAMP5Q8TAC9 235 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 ZSCAN18Q8TBC5 510 aaPredicted RBP27.6■■■□□ 2.01
NME3-209ENST00000566600 FBXO32Q969P5 355 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 E2F7Q96AV8 911 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 ZSWIM3Q96MP5 696 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 ASB16Q96NS5 453 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 GANQ9H2C0 597 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 TRPV4Q9HBA0 871 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 AJAP1Q9UKB5 411 aaPredicted RBP27.6■■■□□ 2.01
NME3-209ENST00000566600 SORCS3Q9UPU3 1222 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 NCANO14594 1321 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 A0A1B0GTH6 734 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 FAM92AA1XBS5 289 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 HHLA1C9JL84 531 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 FOXN3O00409 490 aaPredicted RBP27.59■■■□□ 2.01
NME3-209ENST00000566600 XPO1O14980 1071 aaKnown RBP27.59■■■□□ 2.01
NME3-209ENST00000566600 ASGR2P07307 311 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 PDE6CP51160 858 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 MEA1Q16626 185 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 STXBP5Q5T5C0 1151 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 PARM1Q6UWI2 310 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 FAM71AQ8IYT1 594 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 ZFP14Q9HCL3 533 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 NUMBLQ9Y6R0 609 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 PATJQ8NI35 1801 aa27.59■■■□□ 2.01
NME3-209ENST00000566600 ECI2O75521 394 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 TADA3O75528 432 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 ALADP13716 330 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 PFKLP17858 780 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 KLK7P49862 253 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 PDE4CQ08493 712 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 TDGQ13569 410 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 POTEHQ6S545 545 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 PIGZQ86VD9 579 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 ZNF606Q8WXB4 792 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 FGF14Q92915 247 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 ELSPBP1Q96BH3 223 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 ZSWIM1Q9BR11 485 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 MUTYHQ9UIF7 546 aa27.58■■■□□ 2.01
NME3-209ENST00000566600 DENND4CQ5VZ89 1909 aa27.57■■■□□ 2
NME3-209ENST00000566600 ZNF638Q14966 1978 aaKnown RBP27.57■■■□□ 2
NME3-209ENST00000566600 ZNF840PA6NDX5 716 aa27.57■■■□□ 2
NME3-209ENST00000566600 M0QYV0 167 aa27.57■■■□□ 2
NME3-209ENST00000566600 CYP26A1O43174 497 aa27.57■■■□□ 2
NME3-209ENST00000566600 THAP12O43422 761 aa27.57■■■□□ 2
NME3-209ENST00000566600 DCXO43602 365 aa27.57■■■□□ 2
NME3-209ENST00000566600 AVPR1AP37288 418 aa27.57■■■□□ 2
NME3-209ENST00000566600 KIF11P52732 1056 aa27.57■■■□□ 2
NME3-209ENST00000566600 POLR2FP61218 127 aaKnown RBP27.57■■■□□ 2
NME3-209ENST00000566600 FANCCQ00597 558 aa27.57■■■□□ 2
NME3-209ENST00000566600 PKDCCQ504Y2 493 aa27.57■■■□□ 2
NME3-209ENST00000566600 CMTM8Q8IZV2 173 aa27.57■■■□□ 2
NME3-209ENST00000566600 MAB21L3Q8N8X9 362 aa27.57■■■□□ 2
NME3-209ENST00000566600 UBA3Q8TBC4 463 aa27.57■■■□□ 2
NME3-209ENST00000566600 SLC46A2Q9BY10 475 aa27.57■■■□□ 2
NME3-209ENST00000566600 SCML2Q9UQR0 700 aa27.57■■■□□ 2
NME3-209ENST00000566600 OBSL1O75147 1896 aa27.56■■■□□ 2
NME3-209ENST00000566600 TRAV19A0A0A6YYK7 116 aa27.56■■■□□ 2
NME3-209ENST00000566600 A0A1W2PQC6 194 aa27.56■■■□□ 2
NME3-209ENST00000566600 TEX33O43247 280 aa27.56■■■□□ 2
NME3-209ENST00000566600 PLA2G4AP47712 749 aa27.56■■■□□ 2
NME3-209ENST00000566600 TXNDC8Q6A555 127 aa27.56■■■□□ 2
NME3-209ENST00000566600 GPRIN1Q7Z2K8 1008 aa27.56■■■□□ 2
NME3-209ENST00000566600 ARID3BQ8IVW6 561 aaPredicted RBP27.56■■■□□ 2
NME3-209ENST00000566600 UBALD2Q8IYN6 164 aa27.56■■■□□ 2
NME3-209ENST00000566600 SLC44A3Q8N4M1 653 aa27.56■■■□□ 2
NME3-209ENST00000566600 NAP1L5Q96NT1 182 aaPredicted RBP27.56■■■□□ 2
NME3-209ENST00000566600 F8VZ95 297 aa27.55■■■□□ 2
NME3-209ENST00000566600 DLL1O00548 723 aa27.55■■■□□ 2
NME3-209ENST00000566600 CALCAP01258 141 aa27.55■■■□□ 2
NME3-209ENST00000566600 CLCN1P35523 988 aa27.55■■■□□ 2
NME3-209ENST00000566600 NR1I3Q14994 352 aa27.55■■■□□ 2
NME3-209ENST00000566600 RAB41Q5JT25 222 aa27.55■■■□□ 2
NME3-209ENST00000566600 SNX30Q5VWJ9 437 aa27.55■■■□□ 2
NME3-209ENST00000566600 RSAD2Q8WXG1 361 aa27.55■■■□□ 2
NME3-209ENST00000566600 KCTD13Q8WZ19 329 aa27.55■■■□□ 2
NME3-209ENST00000566600 SPAG5Q96R06 1193 aa27.55■■■□□ 2
NME3-209ENST00000566600 KXD1Q9BQD3 176 aa27.55■■■□□ 2
NME3-209ENST00000566600 LRRC4Q9HBW1 653 aa27.55■■■□□ 2
NME3-209ENST00000566600 TRPC7Q9HCX4 862 aa27.55■■■□□ 2
NME3-209ENST00000566600 TLR8Q9NR97 1041 aaKnown RBP27.55■■■□□ 2
NME3-209ENST00000566600 USP3Q9Y6I4 520 aa27.55■■■□□ 2
NME3-209ENST00000566600 MYO10Q9HD67 2058 aa27.55■■■□□ 2
NME3-209ENST00000566600 DPYSL4O14531 572 aa27.54■■■□□ 2
NME3-209ENST00000566600 ABL1P00519 1130 aa27.54■■■□□ 2
NME3-209ENST00000566600 USP17L7P0C7H9 530 aa27.54■■■□□ 2
NME3-209ENST00000566600 FCARP24071 287 aa27.54■■■□□ 2
NME3-209ENST00000566600 UBASH3AP57075 661 aa27.54■■■□□ 2
NME3-209ENST00000566600 TANGO2Q6ICL3 276 aa27.54■■■□□ 2
NME3-209ENST00000566600 CUL9Q8IWT3 2517 aa27.54■■■□□ 2
NME3-209ENST00000566600 SLC35F5Q8WV83 523 aa27.54■■■□□ 2
NME3-209ENST00000566600 SECISBP2LQ93073 1101 aaKnown RBP27.54■■■□□ 2
NME3-209ENST00000566600 NLRC4Q9NPP4 1024 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms