RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 PCDHA1Q9Y5I3 950 aa2.98□□□□□ -1.93
SMG1-212ENST00000566328 CNOT3O75175 753 aaKnown RBP2.97□□□□□ -1.93
SMG1-212ENST00000566328 UNC5CO95185 931 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 FGAP02671 866 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 PDCP20941 246 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 FPR3P25089 353 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 EXOSC9Q06265 439 aaKnown RBP2.97□□□□□ -1.93
SMG1-212ENST00000566328 ABCB5Q2M3G0 1257 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 MGAT5BQ3V5L5 792 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 CCDC157Q569K6 752 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 SDE2Q6IQ49 451 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 TMEM65Q6PI78 240 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 RAB11FIP4Q86YS3 637 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.97□□□□□ -1.93
SMG1-212ENST00000566328 C16orf71Q8IYS4 520 aaPredicted RBP2.97□□□□□ -1.93
SMG1-212ENST00000566328 ABRAQ8N0Z2 381 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 TXLNGQ9NUQ3 528 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 ASIC5Q9NY37 505 aa2.97□□□□□ -1.93
SMG1-212ENST00000566328 CYSRT1A8MQ03 144 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 H3BUI4 141 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 hCG_1984214I3L0E3 225 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 M0R3H8 397 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 CES2O00748 559 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 THP07101 528 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 CSF1RP07333 972 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 CYP19A1P11511 503 aaPredicted RBP2.96□□□□□ -1.94
SMG1-212ENST00000566328 CCND1P24385 295 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 WNT3P56703 355 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 SOX8P57073 446 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 ITKQ08881 620 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 MYO1EQ12965 1108 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 PCBP2Q15366 365 aaKnown RBP eCLIP2.96□□□□□ -1.94
SMG1-212ENST00000566328 CYP1B1Q16678 543 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 TMTC4Q5T4D3 741 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 ZNF549Q6P9A3 640 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 VSTM1Q6UX27 236 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 UBE2Q1Q7Z7E8 422 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 DDX42Q86XP3 938 aaKnown RBP eCLIP2.96□□□□□ -1.94
SMG1-212ENST00000566328 RBMXL3Q8N7X1 1067 aaKnown RBP2.96□□□□□ -1.94
SMG1-212ENST00000566328 PNISRQ8TF01 805 aaKnown RBP2.96□□□□□ -1.94
SMG1-212ENST00000566328 MTFMTQ96DP5 389 aaKnown RBP2.96□□□□□ -1.94
SMG1-212ENST00000566328 PRR25Q96S07 402 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 CXorf36Q9H7Y0 433 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 SARS2Q9NP81 518 aaKnown RBP2.96□□□□□ -1.94
SMG1-212ENST00000566328 SNX15Q9NRS6 342 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 XPR1Q9UBH6 696 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 TRHDEQ9UKU6 1024 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 MRPS17Q9Y2R5 130 aaKnown RBP2.96□□□□□ -1.94
SMG1-212ENST00000566328 TMX2Q9Y320 296 aa2.96□□□□□ -1.94
SMG1-212ENST00000566328 LACTBL1A8MY62 500 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 ERVV-2B6SEH9 535 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 GABRDO14764 452 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 CTSAP10619 480 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 CDC25AP30304 524 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 MAP2K6P52564 334 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 COPB1P53618 953 aaKnown RBP2.95□□□□□ -1.94
SMG1-212ENST00000566328 PRKAG1P54619 331 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 HSF1Q00613 529 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 RHDQ02161 417 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 KRT17Q04695 432 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 LARS2Q15031 903 aaKnown RBP2.95□□□□□ -1.94
SMG1-212ENST00000566328 SLC9C1Q4G0N8 1177 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 KHDC1LQ5JSQ8 128 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 RANBP10Q6VN20 620 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 USP45Q70EL2 814 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 USP43Q70EL4 1123 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 MMP21Q8N119 569 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 PRR18Q8N4B5 295 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 ZNF548Q8NEK5 533 aaPredicted RBP2.95□□□□□ -1.94
SMG1-212ENST00000566328 SLC35A4Q96G79 324 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 HS6ST2Q96MM7 605 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 ZPBPQ9BS86 351 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 SLC13A1Q9BZW2 595 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 SLCO5A1Q9H2Y9 848 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 MLXIPQ9HAP2 919 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 ZSCAN32Q9NX65 697 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 TTC3P53804 2025 aa2.95□□□□□ -1.94
SMG1-212ENST00000566328 GTPBP1O00178 669 aaKnown RBP2.94□□□□□ -1.94
SMG1-212ENST00000566328 PMPCBO75439 489 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 CD63P08962 238 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 HDCP19113 662 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 ADORA2AP29274 412 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 GKP32189 559 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 THBS4P35443 961 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 DGKEP52429 567 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 CFHR1Q03591 330 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 PLS1Q14651 629 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 MLC1Q15049 377 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 LY6KQ17RY6 165 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 ZNF750Q32MQ0 723 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 ZNF628Q5EBL2 1059 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 PDXDC1Q6P996 788 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 DPY19L3Q6ZPD9 716 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 DCDC5Q6ZRR9 648 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 PTCHD4Q6ZW05 846 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 DCP1BQ8IZD4 617 aaKnown RBP2.94□□□□□ -1.94
SMG1-212ENST00000566328 NLRP4Q96MN2 994 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 MESP1Q9BRJ9 268 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 TMEM204Q9BSN7 226 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms