RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ATP2A3Q93084 1043 aa25.27■■□□□ 1.64
RAB40C-209ENST00000565511 CEP295NLQ96MC4 621 aa25.27■■□□□ 1.64
RAB40C-209ENST00000565511 KCNK16Q96T55 309 aa25.27■■□□□ 1.64
RAB40C-209ENST00000565511 ELOVL4Q9GZR5 314 aa25.27■■□□□ 1.64
RAB40C-209ENST00000565511 SMPD4Q9NXE4 827 aa25.27■■□□□ 1.64
RAB40C-209ENST00000565511 RAB23Q9ULC3 237 aa25.27■■□□□ 1.64
RAB40C-209ENST00000565511 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.27■■□□□ 1.64
RAB40C-209ENST00000565511 MYH10P35580 1976 aa25.27■■□□□ 1.64
RAB40C-209ENST00000565511 FAM237AA0A1B0GTK4 181 aa25.26■■□□□ 1.63
RAB40C-209ENST00000565511 RPN1P04843 607 aaKnown RBP25.26■■□□□ 1.63
RAB40C-209ENST00000565511 SPOPLQ6IQ16 392 aa25.26■■□□□ 1.63
RAB40C-209ENST00000565511 FAM160A2Q8N612 972 aaPredicted RBP25.26■■□□□ 1.63
RAB40C-209ENST00000565511 TMEM174Q8WUU8 243 aa25.26■■□□□ 1.63
RAB40C-209ENST00000565511 CD101Q93033 1021 aa25.26■■□□□ 1.63
RAB40C-209ENST00000565511 HHIPQ96QV1 700 aa25.26■■□□□ 1.63
RAB40C-209ENST00000565511 CPQQ9Y646 472 aa25.26■■□□□ 1.63
RAB40C-209ENST00000565511 RETP07949 1114 aa25.25■■□□□ 1.63
RAB40C-209ENST00000565511 OPRD1P41143 372 aa25.25■■□□□ 1.63
RAB40C-209ENST00000565511 SLC7A9P82251 487 aa25.25■■□□□ 1.63
RAB40C-209ENST00000565511 PSMD2Q13200 908 aa25.25■■□□□ 1.63
RAB40C-209ENST00000565511 ZACNQ401N2 412 aa25.25■■□□□ 1.63
RAB40C-209ENST00000565511 ZNF667Q5HYK9 610 aa25.25■■□□□ 1.63
RAB40C-209ENST00000565511 SCAMP5Q8TAC9 235 aa25.25■■□□□ 1.63
RAB40C-209ENST00000565511 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.25■■□□□ 1.635e-7■■■■■ 252.6
RAB40C-209ENST00000565511 PDXKO00764 312 aa25.24■■□□□ 1.63
RAB40C-209ENST00000565511 CYP17A1P05093 508 aa25.24■■□□□ 1.63
RAB40C-209ENST00000565511 DRD1P21728 446 aa25.24■■□□□ 1.63
RAB40C-209ENST00000565511 MESP2Q0VG99 397 aa25.24■■□□□ 1.63
RAB40C-209ENST00000565511 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.24■■□□□ 1.63
RAB40C-209ENST00000565511 FILIP1Q7Z7B0 1213 aa25.24■■□□□ 1.63
RAB40C-209ENST00000565511 ACOT1Q86TX2 421 aa25.24■■□□□ 1.63
RAB40C-209ENST00000565511 SFTPA1Q8IWL2 248 aa25.24■■□□□ 1.63
RAB40C-209ENST00000565511 FUKQ8N0W3 1084 aa25.24■■□□□ 1.63
RAB40C-209ENST00000565511 ZMIZ2Q8NF64 920 aa25.24■■□□□ 1.63
RAB40C-209ENST00000565511 RPLP0P6Q8NHW5 317 aa25.24■■□□□ 1.63
RAB40C-209ENST00000565511 USP25Q9UHP3 1055 aa25.24■■□□□ 1.63
RAB40C-209ENST00000565511 TNFRSF10BO14763 440 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 CLSTN1O94985 981 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 ABL1P00519 1130 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 CCDC130P13994 396 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 CNR2P34972 360 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 SYKP43405 635 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 PGFP49763 221 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 ATXN1P54253 815 aaKnown RBP25.23■■□□□ 1.63
RAB40C-209ENST00000565511 KRT85P78386 507 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 DPYDQ12882 1025 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 CEP135Q66GS9 1140 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 SV2AQ7L0J3 742 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 GPR161Q8N6U8 529 aaKnown RBP25.23■■□□□ 1.63
RAB40C-209ENST00000565511 ZFRQ96KR1 1074 aaKnown RBP25.23■■□□□ 1.63
RAB40C-209ENST00000565511 MAPK8IP1Q9UQF2 711 aa25.23■■□□□ 1.63
RAB40C-209ENST00000565511 BEST1O76090 585 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 PFKLP17858 780 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 ASPAP45381 313 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 AP3M2P53677 418 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 LMNB2Q03252 620 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 CEP68Q76N32 757 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 NUP93Q8N1F7 819 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 TMC2Q8TDI7 906 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 WBP2Q969T9 261 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 TWNKQ96RR1 684 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 SMOQ99835 787 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 MED10Q9BTT4 135 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 GDPD2Q9HCC8 539 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 KRT82Q9NSB4 513 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 CFAP97Q9P2B7 532 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 SLC8A2Q9UPR5 921 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 TRAF3IP3Q9Y228 551 aa25.22■■□□□ 1.63
RAB40C-209ENST00000565511 RHOBTB3O94955 611 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 HLA-DRAP01903 254 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 TRIM49P0CI25 452 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 TRIM49CP0CI26 452 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 CHRM1P11229 460 aaPredicted RBP25.21■■□□□ 1.63
RAB40C-209ENST00000565511 YWHAQP27348 245 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 NDST1P52848 882 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 SLC5A3P53794 718 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 AMPD2Q01433 879 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 KBTBD6Q86V97 674 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 C12orf40Q86WS4 652 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 GAB3Q8WWW8 586 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 FBXO32Q969P5 355 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 APOBEC3GQ9HC16 384 aaKnown RBP25.21■■□□□ 1.63
RAB40C-209ENST00000565511 SEMA4GQ9NTN9 838 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 GMIPQ9P107 970 aa25.21■■□□□ 1.63
RAB40C-209ENST00000565511 COCHO43405 550 aa25.2■■□□□ 1.62
RAB40C-209ENST00000565511 AKAP3O75969 853 aa25.2■■□□□ 1.62
RAB40C-209ENST00000565511 NFATC1O95644 943 aa25.2■■□□□ 1.62
RAB40C-209ENST00000565511 ASS1P00966 412 aaKnown RBP25.2■■□□□ 1.62
RAB40C-209ENST00000565511 PDE6CP51160 858 aa25.2■■□□□ 1.62
RAB40C-209ENST00000565511 CCDC6Q16204 474 aa25.2■■□□□ 1.62
RAB40C-209ENST00000565511 C12orf29Q8N999 325 aa25.2■■□□□ 1.62
RAB40C-209ENST00000565511 SLITRK1Q96PX8 696 aa25.2■■□□□ 1.62
RAB40C-209ENST00000565511 CCSER2Q9H7U1 834 aa25.2■■□□□ 1.62
RAB40C-209ENST00000565511 DMAP1Q9NPF5 467 aaPredicted RBP25.2■■□□□ 1.62
RAB40C-209ENST00000565511 FAM49BQ9NUQ9 324 aa25.2■■□□□ 1.62
RAB40C-209ENST00000565511 IL37Q9NZH6 218 aa25.2■■□□□ 1.62
RAB40C-209ENST00000565511 CHORDC1Q9UHD1 332 aaPredicted RBP25.2■■□□□ 1.62
RAB40C-209ENST00000565511 K7EQS6 105 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 GDF9O60383 454 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 ATG13O75143 517 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms