RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 VAMP7P51809 220 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 FOXK2Q01167 660 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 NR1H3Q13133 447 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 FBXO43Q4G163 708 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 INTS8Q75QN2 995 aaKnown RBP21.12■□□□□ 0.97
CLN6-206ENST00000565471 ERMP1Q7Z2K6 904 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 TTC16Q8NEE8 873 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 PDZD8Q8NEN9 1154 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 SMARCD1Q96GM5 515 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 CCDC34Q96HJ3 373 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 GMEB2Q9UKD1 530 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 RAB23Q9ULC3 237 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 LEFTY2O00292 366 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 AKAP3O75969 853 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 RPL13P26373 211 aaKnown RBP21.11■□□□□ 0.97
CLN6-206ENST00000565471 YWHAQP27348 245 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 PIK3CAP42336 1068 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 GALK1P51570 392 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 ZXDBP98169 803 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 DMWDQ09019 674 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 LAIR1Q6GTX8 287 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 PAQR9Q6ZVX9 377 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 UNC93AQ86WB7 457 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 MED10Q9BTT4 135 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 RNF38Q9H0F5 515 aa21.11■□□□□ 0.97
CLN6-206ENST00000565471 DMAP1Q9NPF5 467 aaPredicted RBP21.11■□□□□ 0.97
CLN6-206ENST00000565471 NFATC1O95644 943 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 EGFP01133 1207 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 HLA-DRAP01903 254 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 ASPAP45381 313 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 ZCWPW2Q504Y3 356 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 PKN3Q6P5Z2 889 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 ACOT1Q86TX2 421 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 WDR5BQ86VZ2 330 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 FUKQ8N0W3 1084 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 CRYBG2Q8N1P7 616 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 CD101Q93033 1021 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 ELMO3Q96BJ8 720 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 RMDN1Q96DB5 314 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 KCNK16Q96T55 309 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 IMPG2Q9BZV3 1241 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 GDPD2Q9HCC8 539 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 FBRSL1Q9HCM7 1045 aaKnown RBP21.1■□□□□ 0.97
CLN6-206ENST00000565471 COMMD8Q9NX08 183 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 IL37Q9NZH6 218 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 MAPK8IP1Q9UQF2 711 aa21.1■□□□□ 0.97
CLN6-206ENST00000565471 CCDC163A0A0D9SF12 145 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 TNFRSF10BO14763 440 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 HRO43593 1189 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 RNF40O75150 1001 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 ABL1P00519 1130 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 KRT13P13646 458 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 PSMC2P35998 433 aaKnown RBP21.09■□□□□ 0.97
CLN6-206ENST00000565471 NDST1P52848 882 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 MCCD1P59942 119 aaPredicted RBP21.09■□□□□ 0.97
CLN6-206ENST00000565471 IFRD2Q12894 506 aaPredicted RBP21.09■□□□□ 0.97
CLN6-206ENST00000565471 SIM2Q14190 667 aaPredicted RBP21.09■□□□□ 0.97
CLN6-206ENST00000565471 EDRF1Q3B7T1 1238 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 SNX30Q5VWJ9 437 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 DDX42Q86XP3 938 aaKnown RBP eCLIP21.09■□□□□ 0.97
CLN6-206ENST00000565471 FAM186BQ8IYM0 893 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 FBXO32Q969P5 355 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 LINC00597Q9H2U6 94 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 KRT82Q9NSB4 513 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 CPQQ9Y646 472 aa21.09■□□□□ 0.97
CLN6-206ENST00000565471 FAM92AA1XBS5 289 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 SLC9A3R1O14745 358 aaPredicted RBP21.08■□□□□ 0.97
CLN6-206ENST00000565471 AP1G2O75843 785 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 TRIM21P19474 475 aaKnown RBP21.08■□□□□ 0.97
CLN6-206ENST00000565471 SLC5A3P53794 718 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 INCA1Q0VD86 236 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 ADAM9Q13443 819 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 BECN1Q14457 450 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 NAIF1Q69YI7 327 aaPredicted RBP21.08■□□□□ 0.97
CLN6-206ENST00000565471 HEATR6Q6AI08 1181 aaKnown RBP21.08■□□□□ 0.97
CLN6-206ENST00000565471 SPOPLQ6IQ16 392 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 PRR23BQ6ZRT6 265 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 CYP3A43Q9HB55 503 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 CSNK1G1Q9HCP0 422 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 HMGXB4Q9UGU5 601 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 SLC8A2Q9UPR5 921 aa21.08■□□□□ 0.97
CLN6-206ENST00000565471 TRIM49P0CI25 452 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 TRIM49CP0CI26 452 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 MBL2P11226 248 aaPredicted RBP21.07■□□□□ 0.96
CLN6-206ENST00000565471 TGM1P22735 817 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 GCLMP48507 274 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 TUBP50607 506 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 PPP3CAQ08209 521 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 ZMIZ2Q8NF64 920 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 CCDC26Q8TAB7 109 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 SCAMP5Q8TAC9 235 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 SLC2A14Q8TDB8 520 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 TAS1R2Q8TE23 839 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 EZH1Q92800 747 aaPredicted RBP21.07■□□□□ 0.96
CLN6-206ENST00000565471 SMOQ99835 787 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 SMPD4Q9NXE4 827 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 DLL3Q9NYJ7 618 aa21.07■□□□□ 0.96
CLN6-206ENST00000565471 LRP3O75074 770 aa21.06■□□□□ 0.96
CLN6-206ENST00000565471 RETP07949 1114 aa21.06■□□□□ 0.96
CLN6-206ENST00000565471 ZDHHC11BP0C7U3 371 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms