RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 CELF1Q92879 486 aaKnown RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 P2RX5Q93086 422 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 VPS50Q96JG6 964 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 RADILQ96JH8 1075 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 MAELQ96JY0 434 aaKnown RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 FAM167AQ96KS9 214 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 CATSPER2Q96P56 530 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 MMS19Q96T76 1030 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 NUP88Q99567 741 aaPredicted RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 SH3GL2Q99962 352 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 SLF1Q9BQI6 1058 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 NUDT16L1Q9BRJ7 211 aaKnown RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 ADPGKQ9BRR6 497 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 TRIM4Q9C037 500 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 MROH8Q9H579 483 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 C8orf33Q9H7E9 229 aaPredicted RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 MCM9Q9NXL9 1143 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 TAB2Q9NYJ8 693 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 RRN3Q9NYV6 651 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 RNF14Q9UBS8 474 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 HESX1Q9UBX0 185 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 MALT1Q9UDY8 824 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 PLAGL2Q9UPG8 496 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 SAR1BQ9Y6B6 198 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 MYH2Q9UKX2 1941 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 MAST2Q6P0Q8 1798 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 SPATA31A6Q5VVP1 1343 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 COL24A1Q17RW2 1714 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 DOT1LQ8TEK3 1739 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 CCDC85CA6NKD9 419 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 SMIM22K7EJ46 135 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 AGPSO00116 658 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 UBXN8O00124 270 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 EBAG9O00559 213 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 PJA2O43164 708 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 CYTH3O43739 400 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 KRT86O43790 486 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 AHCYL1O43865 530 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 CTNND1O60716 968 aaKnown RBP5.43□□□□□ -1.54
CAPN3-214ENST00000565274 TSC22D2O75157 780 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 TNFRSF21O75509 655 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 USP1O94782 785 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 ADH5P11766 374 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 EEF2P13639 858 aaKnown RBP5.43□□□□□ -1.54
CAPN3-214ENST00000565274 IL1R1P14778 569 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 RPL9P32969 192 aaKnown RBP5.43□□□□□ -1.54
CAPN3-214ENST00000565274 MCM7P33993 719 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 EVI2BP34910 448 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 IDUAP35475 653 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 HNF1BP35680 557 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 ETFBP38117 255 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 CCT6AP40227 531 aaKnown RBP5.43□□□□□ -1.54
CAPN3-214ENST00000565274 BEX3Q00994 111 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 EHHADHQ08426 723 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 ZNF792Q3KQV3 632 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 MMEL1Q495T6 779 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 FUT11Q495W5 492 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 ALKBH5Q6P6C2 394 aaKnown RBP5.43□□□□□ -1.54
CAPN3-214ENST00000565274 CCNI2Q6ZMN8 369 aaPredicted RBP5.43□□□□□ -1.54
CAPN3-214ENST00000565274 ZNF765Q7L2R6 523 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 NUP54Q7Z3B4 507 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 NKAIN4Q8IVV8 208 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 GUF1Q8N442 669 aaKnown RBP5.43□□□□□ -1.54
CAPN3-214ENST00000565274 LRRC71Q8N4P6 559 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 ANKRD53Q8N9V6 530 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 LINC00116Q8NCU8 138 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 CAGE1Q8TC20 777 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 ADAMTS18Q8TE60 1221 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 GTF3C2Q8WUA4 911 aaPredicted RBP5.43□□□□□ -1.54
CAPN3-214ENST00000565274 KAT2BQ92831 832 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 CAVIN3Q969G5 261 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 DTNBP1Q96EV8 351 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 TTC25Q96NG3 672 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 TMEM47Q9BQJ4 181 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 TRIM9Q9C026 710 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 MTMR12Q9C0I1 747 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 TMEM60Q9H2L4 133 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 SOX17Q9H6I2 414 aaPredicted RBP5.43□□□□□ -1.54
CAPN3-214ENST00000565274 RIOX1Q9H6W3 641 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 ACAD9Q9H845 621 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 LIN28AQ9H9Z2 209 aaKnown RBP5.43□□□□□ -1.54
CAPN3-214ENST00000565274 C6orf50Q9HD87 102 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 PAK6Q9NQU5 681 aaPredicted RBP5.43□□□□□ -1.54
CAPN3-214ENST00000565274 RAD18Q9NS91 495 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 FNIP2Q9P278 1114 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 ATPIF1Q9UII2 106 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 GJD2Q9UKL4 321 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 DMTF1Q9Y222 760 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 FAM50BQ9Y247 325 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 CD2APQ9Y5K6 639 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 ACTL7BQ9Y614 415 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 FAM169AQ9Y6X4 670 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 COL4A1P02462 1669 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 ATP8B3O60423 1300 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 FAM205AQ6ZU69 1335 aa5.43□□□□□ -1.54
CAPN3-214ENST00000565274 MYH6P13533 1939 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 IGKV6D-41A0A0C4DH26 115 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 SSU72P8A0A1W2PR75 194 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 SRRM3A6NNA2 597 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms