RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 FAM187BQ17R55 369 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 MAP3K21Q5TCX8 1036 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 ATF7IP2Q5U623 682 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 LVRNQ6Q4G3 990 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 ARCQ7LC44 396 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 PHLDB2Q86SQ0 1253 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 LRRC6Q86X45 466 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 RHPN2Q8IUC4 686 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 PASD1Q8IV76 773 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 FITM2Q8N6M3 262 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 NAT8LQ8N9F0 302 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 MCUQ8NE86 351 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 REPS2Q8NFH8 660 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 CMASQ8NFW8 434 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-249ENST00000564606 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.97□□□□□ -1.13
ATXN3-249ENST00000564606 PIP4K2CQ8TBX8 421 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 ACTL9Q8TC94 416 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 ACMSDQ8TDX5 336 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 STK32AQ8WU08 396 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 NSMCE1Q8WV22 266 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 TMEM143Q96AN5 459 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 ERP27Q96DN0 273 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 WRNIP1Q96S55 665 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 PAFAH2Q99487 392 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 TRIM6Q9C030 488 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-249ENST00000564606 LRRC4CQ9HCJ2 640 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 KCNK4Q9NYG8 393 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 DNAJB4Q9UDY4 337 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 XPO7Q9UIA9 1087 aaKnown RBP7.97□□□□□ -1.13
ATXN3-249ENST00000564606 ITGA11Q9UKX5 1188 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF214Q9UL59 606 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-249ENST00000564606 R3HDM2Q9Y2K5 976 aaKnown RBP7.97□□□□□ -1.13
ATXN3-249ENST00000564606 DERAQ9Y315 318 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 NUB1Q9Y5A7 615 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 SCN9AQ15858 1988 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 A6NJR5 290 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 ASB14A6NK59 587 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 F8W8V4 182 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 H7C0C1 242 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 APOL1O14791 398 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 GYG2O15488 501 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 SNUPNO95149 360 aaKnown RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 RBP3P10745 1247 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 ESRRAP11474 423 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 MLNP12872 115 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 ACADSP16219 412 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 TAL1P17542 331 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 GCKP35557 465 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 FDFT1P37268 417 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 ACADSBP45954 432 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 ATP5OP48047 213 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 ZNF135P52742 658 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 HK2P52789 917 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 BASP1P80723 227 aaKnown RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 OTUD4Q01804 1114 aaKnown RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 SLC18A2Q05940 514 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 PTPN11Q06124 597 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 PTK7Q13308 1070 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 MOGSQ13724 837 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 CAPSQ13938 189 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 DPYSL3Q14195 570 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 NOMO1Q15155 1222 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 TAF11Q15544 211 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 CCDC142Q17RM4 750 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 BBS9Q3SYG4 887 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 DAB2IPQ5VWQ8 1189 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 NLRP9Q7RTR0 991 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 TAS1R3Q7RTX0 852 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 TRMT1LQ7Z2T5 733 aaKnown RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 SESTD1Q86VW0 696 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 CRLF3Q8IUI8 442 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 PSTKQ8IV42 348 aaKnown RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 WDR75Q8IWA0 830 aaKnown RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 KIRREL3Q8IZU9 778 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 ARHGAP18Q8N392 663 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 ENDOVQ8N8Q3 282 aaKnown RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 FBXO36Q8NEA4 188 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 PPP1R14CQ8TAE6 165 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 GABPB2Q8TAK5 448 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 CCDC110Q8TBZ0 833 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 SPATA18Q8TC71 538 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 ASAP3Q8TDY4 903 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 PPP4R1Q8TF05 950 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 AGAP11Q8TF27 550 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 PRPF31Q8WWY3 499 aaKnown RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 MIEF2Q96C03 454 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 FAF2Q96CS3 445 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 MCRS1Q96EZ8 462 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 TMEM176AQ96HP8 235 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 C7orf26Q96N11 449 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 TEPSINQ96N21 525 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 ZNF670Q9BS34 389 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 BTBD10Q9BSF8 475 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 DHRS4Q9BTZ2 278 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 BCO2Q9BYV7 579 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 GLIS2Q9BZE0 524 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 TLE6Q9H808 572 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 APOBEC3GQ9HC16 384 aaKnown RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 SPATS2LQ9NUQ6 558 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms