RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 TRUB2O95900 331 aaKnown RBP16.31■□□□□ 0.2
COMMD4-210ENST00000564587 ALDH2P05091 517 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 RARAP10276 462 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 LCP1P13796 627 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 EPHB4P54760 987 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 SLC7A5Q01650 507 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 DR1Q01658 176 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 GUCY2DQ02846 1103 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 SLC25A11Q02978 314 aaKnown RBP16.31■□□□□ 0.2
COMMD4-210ENST00000564587 YWHAHQ04917 246 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-210ENST00000564587 IKBKEQ14164 716 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 TFDP3Q5H9I0 405 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 EMBQ6PCB8 327 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 CLEC20AQ6ZU45 233 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 SYDE1Q6ZW31 735 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-210ENST00000564587 HDXQ7Z353 690 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 VSIG1Q86XK7 387 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 ZNF280BQ86YH2 543 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 SCUBE3Q8IX30 993 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 DCP1BQ8IZD4 617 aaKnown RBP16.31■□□□□ 0.2
COMMD4-210ENST00000564587 SIX6OS1Q8N1H7 587 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 SLCO2A1Q92959 643 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 PCED1BQ96HM7 432 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 SLITRK1Q96PX8 696 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 LPIN3Q9BQK8 851 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 TRIM62Q9BVG3 475 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 C11orf49Q9H6J7 331 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 EPB41L5Q9HCM4 733 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 CSNK1G1Q9HCP0 422 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 PNPLA8Q9NP80 782 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 CNGB3Q9NQW8 809 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 FAM114A2Q9NRY5 505 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 TMEM39AQ9NV64 488 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 USP18Q9UMW8 372 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 TSC2P49815 1807 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 BHMG1C9JSJ3 638 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-210ENST00000564587 PRPSAP2O60256 369 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 EFCAB14O75071 495 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 CLTBP09497 229 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 RALAP11233 206 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 IGFBP6P24592 240 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-210ENST00000564587 MIPP30301 263 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 GJC1P36383 396 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 COILP38432 576 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-210ENST00000564587 DRG2P55039 364 aaKnown RBP16.3■□□□□ 0.2
COMMD4-210ENST00000564587 MRPS5P82675 430 aaKnown RBP16.3■□□□□ 0.2
COMMD4-210ENST00000564587 LMNB2Q03252 620 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 NNTQ13423 1086 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 SIX1Q15475 284 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-210ENST00000564587 CCNG2Q16589 344 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 KIAA0319Q5VV43 1072 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 AADACL2Q6P093 401 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 CCDC137Q6PK04 289 aaKnown RBP16.3■□□□□ 0.2
COMMD4-210ENST00000564587 SPOCD1Q6ZMY3 1216 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 MAP7D3Q8IWC1 876 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 CRIPAKQ8N1N5 446 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 SCML4Q8N228 414 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 TTC13Q8NBP0 860 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 CMASQ8NFW8 434 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-210ENST00000564587 HDAC7Q8WUI4 952 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 TEKT4Q8WW24 435 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 RTP3Q9BQQ7 232 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 DDX23Q9BUQ8 820 aaKnown RBP16.3■□□□□ 0.2
COMMD4-210ENST00000564587 PPP1R12CQ9BZL4 782 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 FAM129AQ9BZQ8 928 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 ACBD3Q9H3P7 528 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 TMEM51Q9NW97 253 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 RRN3Q9NYV6 651 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.3■□□□□ 0.2
COMMD4-210ENST00000564587 AMACRQ9UHK6 382 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 FAN1Q9Y2M0 1017 aa16.3■□□□□ 0.2
COMMD4-210ENST00000564587 LRRD1A4D1F6 860 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 CLDN5O00501 218 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 DAB1O75553 588 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 GABBR2O75899 941 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 FLT3P36888 993 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 CCL23P55773 120 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 MAP3K7CLP57077 242 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 ADIGQ0VDE8 80 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 KLF1Q13351 362 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-210ENST00000564587 PDK2Q15119 407 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 NFE2Q16621 373 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-210ENST00000564587 CCDC14Q49A88 953 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 PAN2Q504Q3 1202 aaKnown RBP16.29■□□□□ 0.2
COMMD4-210ENST00000564587 RAB41Q5JT25 222 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 STRADAQ7RTN6 431 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 ADAT2Q7Z6V5 191 aaKnown RBP16.29■□□□□ 0.2
COMMD4-210ENST00000564587 CCDC105Q8IYK2 499 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 LRRC43Q8N309 656 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 ARFGAP1Q8N6T3 406 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 IRGQQ8WZA9 623 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 SEC14L1Q92503 715 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 CENPIQ92674 756 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-210ENST00000564587 KHSRPQ92945 711 aaKnown RBP eCLIP16.29■□□□□ 0.2
COMMD4-210ENST00000564587 MYLPFQ96A32 169 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 RNF25Q96BH1 459 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-210ENST00000564587 SCLYQ96I15 445 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 PKMYT1Q99640 499 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 NRDE2Q9H7Z3 1164 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms