RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 HS2ST1Q7LGA3 356 aa15.02■□□□□ -0
CDR2-204ENST00000564542 DDX42Q86XP3 938 aaKnown RBP eCLIP15.02■□□□□ -0
CDR2-204ENST00000564542 ADGRG2Q8IZP9 1017 aa15.02■□□□□ -0
CDR2-204ENST00000564542 ALLCQ8N6M5 410 aa15.02■□□□□ -0
CDR2-204ENST00000564542 WHAMMQ8TF30 809 aa15.02■□□□□ -0
CDR2-204ENST00000564542 SLITRK1Q96PX8 696 aa15.02■□□□□ -0
CDR2-204ENST00000564542 USP28Q96RU2 1077 aa15.02■□□□□ -0
CDR2-204ENST00000564542 PNKPQ96T60 521 aa15.02■□□□□ -0
CDR2-204ENST00000564542 ELOVL4Q9GZR5 314 aa15.02■□□□□ -0
CDR2-204ENST00000564542 SNX25Q9H3E2 840 aa15.02■□□□□ -0
CDR2-204ENST00000564542 SMPD4Q9NXE4 827 aa15.02■□□□□ -0
CDR2-204ENST00000564542 ASPMQ8IZT6 3477 aa15.02□□□□□ -0.01
CDR2-204ENST00000564542 PLXND1Q9Y4D7 1925 aa15.02□□□□□ -0.01
CDR2-204ENST00000564542 ABCA7Q8IZY2 2146 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 PATE3B3GLJ2 98 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 CDX4O14627 284 aaPredicted RBP15.01□□□□□ -0.01
CDR2-204ENST00000564542 KAT7O95251 611 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 ADH1CP00326 375 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 ABL1P00519 1130 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 APODP05090 189 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 FAM163BP0C2L3 166 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 HNRNPLP14866 589 aaKnown RBP eCLIP15.01□□□□□ -0.016e-7■□□□□ 10.8
CDR2-204ENST00000564542 CSRP1P21291 193 aaKnown RBP15.01□□□□□ -0.01
CDR2-204ENST00000564542 SYT1P21579 422 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 HOXD13P35453 343 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 DHPSP49366 369 aaPredicted RBP15.01□□□□□ -0.01
CDR2-204ENST00000564542 CACNA2D1P54289 1103 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 TNNC1P63316 161 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 TAF10Q12962 218 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 TDRD10Q5VZ19 366 aaKnown RBP15.01□□□□□ -0.01
CDR2-204ENST00000564542 TTC30AQ86WT1 665 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 SFTPA1Q8IWL2 248 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 PDILTQ8N807 584 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 IL17RCQ8NAC3 791 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 TXNDC5Q8NBS9 432 aaKnown RBP15.01□□□□□ -0.01
CDR2-204ENST00000564542 OR6B3Q8NGW1 331 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 HPS3Q969F9 1004 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 SPACA7Q96KW9 195 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 CGRRF1Q99675 332 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 LRRC27Q9C0I9 530 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 TMEM30AQ9NV96 361 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 CFAP97Q9P2B7 532 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 EVLQ9UI08 416 aaPredicted RBP15.01□□□□□ -0.01
CDR2-204ENST00000564542 ZZEF1O43149 2961 aa15.01□□□□□ -0.01
CDR2-204ENST00000564542 A0A0A0MRY4 1105 aa15□□□□□ -0.01
CDR2-204ENST00000564542 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15□□□□□ -0.01
CDR2-204ENST00000564542 SGK1O00141 431 aa15□□□□□ -0.01
CDR2-204ENST00000564542 SCAMP3O14828 347 aaKnown RBP15□□□□□ -0.01
CDR2-204ENST00000564542 KLF8O95600 359 aaPredicted RBP15□□□□□ -0.01
CDR2-204ENST00000564542 DLATP10515 647 aaKnown RBP15□□□□□ -0.01
CDR2-204ENST00000564542 MBL2P11226 248 aaPredicted RBP15□□□□□ -0.01
CDR2-204ENST00000564542 ADH5P11766 374 aa15□□□□□ -0.01
CDR2-204ENST00000564542 CEACAM1P13688 526 aa15□□□□□ -0.01
CDR2-204ENST00000564542 PTPN1P18031 435 aaKnown RBP15□□□□□ -0.01
CDR2-204ENST00000564542 TNNI1P19237 187 aa15□□□□□ -0.01
CDR2-204ENST00000564542 TIE1P35590 1138 aa15□□□□□ -0.01
CDR2-204ENST00000564542 P2RY2P41231 377 aa15□□□□□ -0.01
CDR2-204ENST00000564542 GRIA2P42262 883 aa15□□□□□ -0.01
CDR2-204ENST00000564542 SLC6A11P48066 632 aa15□□□□□ -0.01
CDR2-204ENST00000564542 MESP2Q0VG99 397 aa15□□□□□ -0.01
CDR2-204ENST00000564542 LMAN2Q12907 356 aa15□□□□□ -0.01
CDR2-204ENST00000564542 FOXC1Q12948 553 aa15□□□□□ -0.01
CDR2-204ENST00000564542 PSMD6Q15008 389 aa15□□□□□ -0.01
CDR2-204ENST00000564542 EOGTQ5NDL2 527 aa15□□□□□ -0.01
CDR2-204ENST00000564542 RHBDF2Q6PJF5 856 aa15□□□□□ -0.01
CDR2-204ENST00000564542 UNQ6494/PRO21346Q6UXR6 183 aa15□□□□□ -0.01
CDR2-204ENST00000564542 LPCAT2Q7L5N7 544 aa15□□□□□ -0.01
CDR2-204ENST00000564542 EPM2AIP1Q7L775 607 aaPredicted RBP15□□□□□ -0.01
CDR2-204ENST00000564542 C12orf40Q86WS4 652 aa15□□□□□ -0.01
CDR2-204ENST00000564542 B3GALNT2Q8NCR0 500 aa15□□□□□ -0.01
CDR2-204ENST00000564542 PDZD8Q8NEN9 1154 aa15□□□□□ -0.01
CDR2-204ENST00000564542 PIGKQ92643 395 aa15□□□□□ -0.01
CDR2-204ENST00000564542 FNBP1Q96RU3 617 aa15□□□□□ -0.01
CDR2-204ENST00000564542 TRIM9Q9C026 710 aa15□□□□□ -0.01
CDR2-204ENST00000564542 ZNF518BQ9C0D4 1074 aa15□□□□□ -0.01
CDR2-204ENST00000564542 CUEDC2Q9H467 287 aa15□□□□□ -0.01
CDR2-204ENST00000564542 DPEP3Q9H4B8 488 aa15□□□□□ -0.01
CDR2-204ENST00000564542 POLMQ9NP87 494 aaPredicted RBP15□□□□□ -0.01
CDR2-204ENST00000564542 ARHGEF4Q9NR80 690 aa15□□□□□ -0.01
CDR2-204ENST00000564542 AGPAT3Q9NRZ7 376 aa15□□□□□ -0.01
CDR2-204ENST00000564542 KBTBD4Q9NVX7 518 aa15□□□□□ -0.01
CDR2-204ENST00000564542 TBC1D14Q9P2M4 693 aa15□□□□□ -0.01
CDR2-204ENST00000564542 WASF3Q9UPY6 502 aa15□□□□□ -0.01
CDR2-204ENST00000564542 UBE4BO95155 1302 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 E2F8A0AVK6 867 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 C1QTNF9BB2RNN3 333 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 TNFRSF10BO14763 440 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 TGFB1I1O43294 461 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 STAU1O95793 577 aaKnown RBP14.99□□□□□ -0.01
CDR2-204ENST00000564542 CST3P01034 146 aaPredicted RBP14.99□□□□□ -0.01
CDR2-204ENST00000564542 C1QTNF9P0C862 333 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 KIR2DL1P43626 348 aaPredicted RBP14.99□□□□□ -0.01
CDR2-204ENST00000564542 NASPP49321 788 aaPredicted RBP14.99□□□□□ -0.01
CDR2-204ENST00000564542 IRX4P78413 519 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 KDSRQ06136 332 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 CYP24A1Q07973 514 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 IFRD2Q12894 506 aaPredicted RBP14.99□□□□□ -0.01
CDR2-204ENST00000564542 E2F4Q16254 413 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 WDR72Q3MJ13 1102 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 TRIM61Q5EBN2 209 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms