RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SMYD3Q9H7B4 428 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 CFAP45Q9UL16 551 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 SDK1Q7Z5N4 2213 aa25.41■■□□□ 1.66
NME3-206ENST00000564252 LRRIQ3A6PVS8 624 aaPredicted RBP25.41■■□□□ 1.66
NME3-206ENST00000564252 SLC30A4O14863 429 aa25.41■■□□□ 1.66
NME3-206ENST00000564252 PHACTR2O75167 634 aa25.41■■□□□ 1.66
NME3-206ENST00000564252 AKAP3O75969 853 aa25.41■■□□□ 1.66
NME3-206ENST00000564252 OAS1P00973 400 aaKnown RBP25.41■■□□□ 1.66
NME3-206ENST00000564252 RAP1GAPP47736 663 aa25.41■■□□□ 1.66
NME3-206ENST00000564252 CLDN10P78369 228 aa25.41■■□□□ 1.66
NME3-206ENST00000564252 TAF10Q12962 218 aa25.41■■□□□ 1.66
NME3-206ENST00000564252 STK4Q13043 487 aa25.41■■□□□ 1.66
NME3-206ENST00000564252 GAB4Q2WGN9 574 aa25.41■■□□□ 1.66
NME3-206ENST00000564252 KIAA0895Q8NCT3 520 aa25.41■■□□□ 1.66
NME3-206ENST00000564252 DMAC2Q9NW81 257 aa25.41■■□□□ 1.66
NME3-206ENST00000564252 AXIN1O15169 862 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 GDF9O60383 454 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 FOXD2O60548 495 aaPredicted RBP25.4■■□□□ 1.66
NME3-206ENST00000564252 CCDC192P0DO97 292 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 OPRD1P41143 372 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 CDH8P55286 799 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 BIRC3Q13489 604 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 KIAA1958Q8N8K9 716 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 TMEM174Q8WUU8 243 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 ACDQ96AP0 544 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 PAGE5Q96GU1 130 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 ARRDC1-AS1Q9H2J1 176 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 CPQQ9Y646 472 aa25.4■■□□□ 1.66
NME3-206ENST00000564252 EPN2O95208 641 aa25.39■■□□□ 1.66
NME3-206ENST00000564252 C4BPAP04003 597 aaKnown RBP25.39■■□□□ 1.66
NME3-206ENST00000564252 AP3M2P53677 418 aa25.39■■□□□ 1.66
NME3-206ENST00000564252 PSMD2Q13200 908 aa25.39■■□□□ 1.66
NME3-206ENST00000564252 DMC1Q14565 340 aa25.39■■□□□ 1.66
NME3-206ENST00000564252 ZNF699Q32M78 642 aa25.39■■□□□ 1.66
NME3-206ENST00000564252 FILIP1Q7Z7B0 1213 aa25.39■■□□□ 1.66
NME3-206ENST00000564252 SLITRK1Q96PX8 696 aa25.39■■□□□ 1.66
NME3-206ENST00000564252 EXOC1Q9NV70 894 aa25.39■■□□□ 1.66
NME3-206ENST00000564252 VNN1O95497 513 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 ABL1P00519 1130 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 CYP17A1P05093 508 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 IFRD2Q12894 506 aaPredicted RBP25.38■■□□□ 1.65
NME3-206ENST00000564252 NCOA4Q13772 614 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 KMT5BQ4FZB7 885 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 ZNF667Q5HYK9 610 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 SLC9A9Q8IVB4 645 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 NUP93Q8N1F7 819 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 ELMO3Q96BJ8 720 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 ZC3H10Q96K80 434 aaKnown RBP25.38■■□□□ 1.65
NME3-206ENST00000564252 KCTD10Q9H3F6 313 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 SMPD4Q9NXE4 827 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 EBF1Q9UH73 591 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 LAMA1P25391 3075 aa25.38■■□□□ 1.65
NME3-206ENST00000564252 K7EQS6 105 aa25.37■■□□□ 1.65
NME3-206ENST00000564252 APBB3O95704 486 aa25.37■■□□□ 1.65
NME3-206ENST00000564252 YWHAQP27348 245 aa25.37■■□□□ 1.65
NME3-206ENST00000564252 SCARA5Q6ZMJ2 495 aa25.37■■□□□ 1.65
NME3-206ENST00000564252 PAQR9Q6ZVX9 377 aa25.37■■□□□ 1.65
NME3-206ENST00000564252 FAM35AQ86V20 835 aa25.37■■□□□ 1.65
NME3-206ENST00000564252 ADGRG2Q8IZP9 1017 aa25.37■■□□□ 1.65
NME3-206ENST00000564252 SPRYD3Q8NCJ5 442 aa25.37■■□□□ 1.65
NME3-206ENST00000564252 USP33Q8TEY7 942 aa25.37■■□□□ 1.65
NME3-206ENST00000564252 KCNK16Q96T55 309 aa25.37■■□□□ 1.65
NME3-206ENST00000564252 SDCBP2Q9H190 292 aa25.37■■□□□ 1.65
NME3-206ENST00000564252 RTN3O95197 1032 aaPredicted RBP25.36■■□□□ 1.65
NME3-206ENST00000564252 ZNF806P0C7X5 589 aa25.36■■□□□ 1.65
NME3-206ENST00000564252 DLG4P78352 724 aa25.36■■□□□ 1.65
NME3-206ENST00000564252 SF3A2Q15428 464 aaKnown RBP25.36■■□□□ 1.65
NME3-206ENST00000564252 CCDC6Q16204 474 aa25.36■■□□□ 1.65
NME3-206ENST00000564252 PLK5Q496M5 336 aa25.36■■□□□ 1.65
NME3-206ENST00000564252 CCDC26Q8TAB7 109 aa25.36■■□□□ 1.65
NME3-206ENST00000564252 OVCA2Q8WZ82 227 aa25.36■■□□□ 1.65
NME3-206ENST00000564252 CFAP97Q9P2B7 532 aa25.36■■□□□ 1.65
NME3-206ENST00000564252 ATP8B3O60423 1300 aa25.36■■□□□ 1.65
NME3-206ENST00000564252 A0A1B0GVL5 298 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 ANTXRLA6NF34 631 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 PDXKO00764 312 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 SLC9A3R1O14745 358 aaPredicted RBP25.35■■□□□ 1.65
NME3-206ENST00000564252 TNFRSF10BO14763 440 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 SCAMP3O14828 347 aaKnown RBP25.35■■□□□ 1.65
NME3-206ENST00000564252 CLSTN1O94985 981 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 MBL2P11226 248 aaPredicted RBP25.35■■□□□ 1.65
NME3-206ENST00000564252 PFKFB1P16118 471 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 DHCR24Q15392 516 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 PLA2G2CQ5R387 149 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 PDZD8Q8NEN9 1154 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 SCAMP5Q8TAC9 235 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 FBXO32Q969P5 355 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 TNIP3Q96KP6 325 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 MED10Q9BTT4 135 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 DUSP15Q9H1R2 295 aaPredicted RBP25.35■■□□□ 1.65
NME3-206ENST00000564252 IL37Q9NZH6 218 aa25.35■■□□□ 1.65
NME3-206ENST00000564252 NR3C1P04150 777 aa25.34■■□□□ 1.65
NME3-206ENST00000564252 CMA1P23946 247 aa25.34■■□□□ 1.65
NME3-206ENST00000564252 SEC13P55735 322 aa25.34■■□□□ 1.65
NME3-206ENST00000564252 ZACNQ401N2 412 aa25.34■■□□□ 1.65
NME3-206ENST00000564252 AASDHQ4L235 1098 aaPredicted RBP25.34■■□□□ 1.65
NME3-206ENST00000564252 DDX42Q86XP3 938 aaKnown RBP eCLIP25.34■■□□□ 1.65
NME3-206ENST00000564252 SMARCD1Q96GM5 515 aa25.34■■□□□ 1.65
NME3-206ENST00000564252 ZFRQ96KR1 1074 aaKnown RBP25.34■■□□□ 1.65
NME3-206ENST00000564252 DMAP1Q9NPF5 467 aaPredicted RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms