RNA–Protein interactions for RNA: ENST00000563919.1

SCAPER-209, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-209ENST00000563919 C19orf48Q6RUI8 117 aa15.8■□□□□ 0.12
SCAPER-209ENST00000563919 GPBP1Q86WP2 473 aa15.8■□□□□ 0.12
SCAPER-209ENST00000563919 NT5DC4Q86YG4 428 aa15.8■□□□□ 0.12
SCAPER-209ENST00000563919 TMEM86AQ8N2M4 240 aa15.8■□□□□ 0.12
SCAPER-209ENST00000563919 KIAA1958Q8N8K9 716 aa15.8■□□□□ 0.12
SCAPER-209ENST00000563919 LINC00301Q8NCQ3 95 aa15.8■□□□□ 0.12
SCAPER-209ENST00000563919 HMGB4Q8WW32 186 aa15.8■□□□□ 0.12
SCAPER-209ENST00000563919 FOXD4L4Q8WXT5 416 aaPredicted RBP15.8■□□□□ 0.12
SCAPER-209ENST00000563919 GTPBP2Q9BX10 602 aaKnown RBP15.8■□□□□ 0.12
SCAPER-209ENST00000563919 CAPN10Q9HC96 672 aa15.8■□□□□ 0.12
SCAPER-209ENST00000563919 BCCIPQ9P287 314 aaKnown RBP eCLIP15.8■□□□□ 0.12
SCAPER-209ENST00000563919 CEP192Q8TEP8 1941 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 SPTLC2O15270 562 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 OPHN1O60890 802 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 HUS1O60921 280 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 ADAM23O75077 832 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 CYP17A1P05093 508 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 SERPINF2P08697 491 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 PFKLP17858 780 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 ABCD1P33897 745 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 KIR2DL1P43626 348 aaPredicted RBP15.79■□□□□ 0.12
SCAPER-209ENST00000563919 MYL7Q01449 175 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 GFPT1Q06210 699 aaPredicted RBP15.79■□□□□ 0.12
SCAPER-209ENST00000563919 SCAPQ12770 1279 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 CCDC142Q17RM4 750 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 EOGTQ5NDL2 527 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 EMC10Q5UCC4 262 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 FILIP1Q7Z7B0 1213 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 SPATA2LQ8IUW3 424 aaPredicted RBP15.79■□□□□ 0.12
SCAPER-209ENST00000563919 SCN4BQ8IWT1 228 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 SPATA18Q8TC71 538 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 FUBP3Q96I24 572 aaKnown RBP eCLIP15.79■□□□□ 0.12
SCAPER-209ENST00000563919 PNKPQ96T60 521 aa15.79■□□□□ 0.12
SCAPER-209ENST00000563919 FBXO2Q9UK22 296 aaPredicted RBP15.79■□□□□ 0.12
SCAPER-209ENST00000563919 KAT7O95251 611 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 IL18RAPO95256 599 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 APODP05090 189 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 CD59P13987 128 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 POLR2BP30876 1174 aaKnown RBP15.78■□□□□ 0.12
SCAPER-209ENST00000563919 EIF2DP41214 584 aaKnown RBP15.78■□□□□ 0.12
SCAPER-209ENST00000563919 MAGEA11P43364 429 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 TNFRSF4P43489 277 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 NUCB2P80303 420 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 HNRNPDQ14103 355 aaKnown RBP15.78■□□□□ 0.12
SCAPER-209ENST00000563919 DHX8Q14562 1220 aaKnown RBP15.78■□□□□ 0.12
SCAPER-209ENST00000563919 DHCR24Q15392 516 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 FAM171BQ6P995 826 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 PDZD3Q86UT5 571 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 OSTM1Q86WC4 334 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 SPATA17Q96L03 361 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 TFIP11Q9UBB9 837 aaKnown RBP15.78■□□□□ 0.12
SCAPER-209ENST00000563919 AGAP1Q9UPQ3 857 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 PCDH15Q96QU1 1955 aa15.78■□□□□ 0.12
SCAPER-209ENST00000563919 TCRBV21S2A2A0A5A6 115 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 GABRDO14764 452 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 AP5Z1O43299 807 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 ITGB3P05106 788 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 ADSSP30520 456 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 ANP32AP39687 249 aaKnown RBP15.77■□□□□ 0.12
SCAPER-209ENST00000563919 GRIA2P42262 883 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 LHX1P48742 406 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 SLC7A9P82251 487 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 TFAMQ00059 246 aaKnown RBP15.77■□□□□ 0.12
SCAPER-209ENST00000563919 RPL6Q02878 288 aaKnown RBP15.77■□□□□ 0.12
SCAPER-209ENST00000563919 SCARA3Q6AZY7 606 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 RHBDF2Q6PJF5 856 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 CCDC73Q6ZRK6 1079 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 C12orf40Q86WS4 652 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 PGBD3Q8N328 593 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 MINDY1Q8N5J2 469 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 C1orf127Q8N9H9 656 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 CXorf38Q8TB03 319 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 RNF38Q9H0F5 515 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 IKZF4Q9H2S9 585 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 ST6GALNAC4Q9H4F1 302 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 ZDHHC4Q9NPG8 344 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 DNAAF2Q9NVR5 837 aaKnown RBP15.77■□□□□ 0.12
SCAPER-209ENST00000563919 GDAP2Q9NXN4 497 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 TRPM5Q9NZQ8 1165 aa15.77■□□□□ 0.12
SCAPER-209ENST00000563919 TENM4Q6N022 2769 aa15.77■□□□□ 0.11
SCAPER-209ENST00000563919 URB1O60287 2271 aaKnown RBP15.77■□□□□ 0.11
SCAPER-209ENST00000563919 MAST4O15021 2626 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 ARHGAP33O14559 1287 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 SLC9A3R1O14745 358 aaPredicted RBP15.76■□□□□ 0.11
SCAPER-209ENST00000563919 HCRTO43612 131 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 CUTAO60888 179 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 PCSK1P29120 753 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 WNT7BP56706 349 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 USP46P62068 366 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 KRT85P78386 507 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 PKP1Q13835 747 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 TRIP6Q15654 476 aaKnown RBP15.76■□□□□ 0.11
SCAPER-209ENST00000563919 COL28A1Q2UY09 1125 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 FOXD4L6Q3SYB3 417 aaPredicted RBP15.76■□□□□ 0.11
SCAPER-209ENST00000563919 RRAGBQ5VZM2 374 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 FOXD4L3Q6VB84 417 aaPredicted RBP15.76■□□□□ 0.11
SCAPER-209ENST00000563919 SLC36A4Q6YBV0 504 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 RABEPKQ7Z6M1 372 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 DEFB119Q8N690 84 aa15.76■□□□□ 0.11
SCAPER-209ENST00000563919 TOP6BLQ8N6T0 577 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms