RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 BCLAF3A2AJT9 711 aaKnown RBP17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 CLDN5O00501 218 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 PPP6R2O75170 966 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 HNRNPLP14866 589 aaKnown RBP eCLIP17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 SLC6A11P48066 632 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 PDE6CP51160 858 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 MYL6P60660 151 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 TAF10Q12962 218 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 WDR72Q3MJ13 1102 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 HS2ST1Q7LGA3 356 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 RASSF3Q86WH2 238 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 TSTD1Q8NFU3 115 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 PLEKHO2Q8TD55 490 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 LSM14BQ9BX40 385 aaKnown RBP17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 B3GNT5Q9BYG0 378 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 LRRC27Q9C0I9 530 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 XYLT2Q9H1B5 865 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 CUEDC2Q9H467 287 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 USP24Q9UPU5 2620 aa17.9■□□□□ 0.46
HDGFL3-203ENST00000563404 RHOBTB1O94844 696 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 ABL1P00519 1130 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 FAM163BP0C2L3 166 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 BCKDHBP21953 392 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 CREB5Q02930 508 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 DHCR24Q15392 516 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 ELF2Q15723 593 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 ST3GAL2Q16842 350 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 RHBDF2Q6PJF5 856 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 TMEM92Q6UXU6 159 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 C12orf40Q86WS4 652 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 CCDC33Q8N5R6 958 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 XXYLT1Q8NBI6 393 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 FNBP1Q96RU3 617 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 MMP17Q9ULZ9 603 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 ABCA7Q8IZY2 2146 aa17.89■□□□□ 0.45
HDGFL3-203ENST00000563404 CUTAO60888 179 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 KCNK5O95279 499 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 STAU1O95793 577 aaKnown RBP17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 CAVIN2O95810 425 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 GBP1P32455 592 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 PPP3CCP48454 512 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 CASP4P49662 377 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 TNNC1P63316 161 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 AMPD3Q01432 767 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 TDRD10Q5VZ19 366 aaKnown RBP17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 PMS2CLQ68D20 193 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 RNF43Q68DV7 783 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 ANO7Q6IWH7 933 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 UNC13DQ70J99 1090 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 KIAA1958Q8N8K9 716 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 IQUBQ8NA54 791 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 B3GALNT2Q8NCR0 500 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 MDGA1Q8NFP4 955 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 ELMO3Q96BJ8 720 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 BLZF1Q9H2G9 400 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 EHD2Q9NZN4 543 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 CFAP97Q9P2B7 532 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 NXF1Q9UBU9 619 aaKnown RBP17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 UBE4BO95155 1302 aa17.88■□□□□ 0.45
HDGFL3-203ENST00000563404 FRYQ5TBA9 3013 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 A8MXQ7 604 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 K7ELQ4 463 aaPredicted RBP17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 CDH8P55286 799 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 IFRD2Q12894 506 aaPredicted RBP17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 CRY1Q16526 586 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 BMT2Q1RMZ1 405 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 PAQR9Q6ZVX9 377 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 CCDC26Q8TAB7 109 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 ZFRQ96KR1 1074 aaKnown RBP17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 CNOT6LQ96LI5 555 aaKnown RBP17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 KCNK16Q96T55 309 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 EDEM2Q9BV94 578 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 ELOVL4Q9GZR5 314 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 SMYD3Q9H7B4 428 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 SLC39A2Q9NP94 309 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 ANGPTL2Q9UKU9 493 aa17.87■□□□□ 0.45
HDGFL3-203ENST00000563404 LNP1A1A4G5 178 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 POLR2DO15514 142 aaKnown RBP17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 YEATS4O95619 227 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 MBL2P11226 248 aaPredicted RBP17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 YWHAQP27348 245 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 SNRPFP62306 86 aaKnown RBP17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 MRPS21P82921 87 aaKnown RBP17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 USP39Q53GS9 565 aaKnown RBP17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 EMC10Q5UCC4 262 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 FOXD4L5Q5VV16 416 aaPredicted RBP17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 C12orf56Q8IXR9 622 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 NUP93Q8N1F7 819 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 PHTF2Q8N3S3 785 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 ALLCQ8N6M5 410 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 IL17RCQ8NAC3 791 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 SCAMP5Q8TAC9 235 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 OLIG1Q8TAK6 271 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 FOXD4L4Q8WXT5 416 aaPredicted RBP17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 CHAMP1Q96JM3 812 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 ZNF396Q96N95 335 aaPredicted RBP17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 SLITRK1Q96PX8 696 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 ZDHHC4Q9NPG8 344 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 CFAP47Q6ZTR5 3102 aa17.86■□□□□ 0.45
HDGFL3-203ENST00000563404 MYOFQ9NZM1 2061 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms