RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 HPS4Q9NQG7 708 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 RAB20Q9NX57 234 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 PCDHGA2Q9Y5H1 932 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 F5P12259 2224 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 NUP210Q8TEM1 1887 aaPredicted RBP12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 USP34Q70CQ2 3546 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 TRDMT1O14717 391 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 PMM2O15305 246 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 AP1G2O75843 785 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 ZDHHC11BP0C7U3 371 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 CCR3P51677 355 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 SLC5A3P53794 718 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 PMS1P54277 932 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 TNK2Q07912 1038 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 TAF10Q12962 218 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 MTAPQ13126 283 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 CCINQ13939 588 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 TXNDC11Q6PKC3 985 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 DDX42Q86XP3 938 aaKnown RBP eCLIP12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 SPEM1Q8N4L4 309 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 CPA6Q8N4T0 437 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 ZBTB44Q8NCP5 570 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 RIN3Q8TB24 985 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 SH3RF2Q8TEC5 729 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 ATP2A3Q93084 1043 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 CYP2S1Q96SQ9 504 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 MED10Q9BTT4 135 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 FBXO44Q9H4M3 255 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 KRT82Q9NSB4 513 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 HMGXB4Q9UGU5 601 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 ARMCX3Q9UH62 379 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 MAN1B1Q9UKM7 699 aa12.96□□□□□ -0.33
NSMCE1-204ENST00000563273 ZFHX2Q9C0A1 2572 aaPredicted RBP12.96□□□□□ -0.34
NSMCE1-204ENST00000563273 COL4A3Q01955 1670 aa12.96□□□□□ -0.34
NSMCE1-204ENST00000563273 FAM200BP0CF97 657 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 TDGF1P13385 188 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 SOX9P48436 509 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 NRLP54845 237 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 MORC3Q14149 939 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 TMEM196Q5HYL7 178 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 WDR44Q5JSH3 913 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 ASCL5Q7RTU5 278 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 FILIP1Q7Z7B0 1213 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 ZMIZ2Q8NF64 920 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 SLC2A14Q8TDB8 520 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 SEMA4DQ92854 862 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 FBXO32Q969P5 355 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 KCNK16Q96T55 309 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 SMOQ99835 787 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 EBF3Q9H4W6 596 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 ZSCAN32Q9NX65 697 aa12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 DUS2Q9NX74 493 aaKnown RBP12.95□□□□□ -0.34
NSMCE1-204ENST00000563273 MYO15AQ9UKN7 3530 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 BICDL2A1A5D9 508 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 OTOL1A6NHN0 477 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 SLC9A3R1O14745 358 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 LILRB5O75023 590 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 GADD45BO75293 160 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 LMNAP02545 664 aaKnown RBP12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 CCDC130P13994 396 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 HOXA6P31267 233 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 IFNAR2P48551 515 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 UBE2HP62256 183 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 CSTF1Q05048 431 aaKnown RBP12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 GRSF1Q12849 480 aaKnown RBP eCLIP12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 NR1H3Q13133 447 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 EML3Q32P44 896 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 CBWD6Q4V339 395 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 CBWD3Q5JTY5 395 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 CBWD5Q5RIA9 395 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 TRIM68Q6AZZ1 485 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 TTI2Q6NXR4 508 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 C12orf29Q8N999 325 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 TRIML1Q8N9V2 468 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 WHAMMQ8TF30 809 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 ERCC4Q92889 916 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 SLC35C1Q96A29 364 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 ELMO3Q96BJ8 720 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 CHFRQ96EP1 664 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 CYFIP2Q96F07 1278 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 EEF2KMTQ96G04 330 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 TWNKQ96RR1 684 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 ECT2Q9H8V3 914 aa12.94□□□□□ -0.34
NSMCE1-204ENST00000563273 KIF26AQ9ULI4 1882 aaPredicted RBP12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 TRIM49BA6NDI0 452 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 PPP1R3GB7ZBB8 358 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 HHLA1C9JL84 531 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 LEFTY2O00292 366 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 P4HA2O15460 535 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 NFATC1O95644 943 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 ARSAP15289 507 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 CD44P16070 742 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 DRD1P21728 446 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 BMP6P22004 513 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 CXCL12P48061 93 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 MAP3K7CLP57077 242 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 ZXDBP98169 803 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 GAS6Q14393 721 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 PON2Q15165 354 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms