RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PDGFBP01127 241 aaPredicted RBP9.04□□□□□ -0.96
UBR1-204ENST00000563239 PAEPP09466 180 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 ZDHHC11BP0C7U3 371 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 VDRP11473 427 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 SRFP11831 508 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 NPR3P17342 541 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 DDX6P26196 483 aaKnown RBP eCLIP9.04□□□□□ -0.96
UBR1-204ENST00000563239 YWHAEP62258 255 aaKnown RBP9.04□□□□□ -0.96
UBR1-204ENST00000563239 ZXDBP98169 803 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 TAF10Q12962 218 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 GRM2Q14416 872 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 IQCB1Q15051 598 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 ARHGAP15Q53QZ3 475 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 CMTM8Q8IZV2 173 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 AOPEPQ8N6M6 819 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 MAB21L3Q8N8X9 362 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 ANKRD52Q8NB46 1076 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 RBBP8NLQ8NC74 664 aaPredicted RBP9.04□□□□□ -0.96
UBR1-204ENST00000563239 USP13Q92995 863 aaPredicted RBP9.04□□□□□ -0.96
UBR1-204ENST00000563239 JAKMIP2Q96AA8 810 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 CYP2S1Q96SQ9 504 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 VPS16Q9H269 839 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 SLITRK6Q9H5Y7 841 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 ZFP14Q9HCL3 533 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 ACP6Q9NPH0 428 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 SLC2A4RGQ9NR83 387 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 COMMD8Q9NX08 183 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 APEX2Q9UBZ4 518 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 KIAA1257Q9ULG3 409 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 CCL26Q9Y258 94 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 COL4A3Q01955 1670 aa9.04□□□□□ -0.96
UBR1-204ENST00000563239 KRBA1A5PL33 1030 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 SHISA7A6NL88 538 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 ARNTLO00327 626 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 RTN3O95197 1032 aaPredicted RBP9.03□□□□□ -0.96
UBR1-204ENST00000563239 LETM1O95202 739 aaPredicted RBP9.03□□□□□ -0.96
UBR1-204ENST00000563239 OLFM2O95897 454 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 CFHP08603 1231 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 ATP1A3P13637 1013 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 CD19P15391 556 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 PTMSP20962 102 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
UBR1-204ENST00000563239 YWHAQP27348 245 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 KLK7P49862 253 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 KIF11P52732 1056 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 COPB1P53618 953 aaKnown RBP9.03□□□□□ -0.96
UBR1-204ENST00000563239 FCHO2Q0JRZ9 810 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 IFRD2Q12894 506 aaPredicted RBP9.03□□□□□ -0.96
UBR1-204ENST00000563239 CNGA2Q16280 664 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 GOLGA7BQ2TAP0 167 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 ZSCAN23Q3MJ62 389 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 SGO2Q562F6 1265 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 RAB41Q5JT25 222 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 KLHDC7AQ5VTJ3 777 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 SNX30Q5VWJ9 437 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 LCLAT1Q6UWP7 414 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 HFE2Q6ZVN8 426 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 MFSD6LQ8IWD5 586 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 ARL14EPQ8N8R7 260 aaPredicted RBP9.03□□□□□ -0.96
UBR1-204ENST00000563239 SPDYE1Q8NFV5 336 aaPredicted RBP9.03□□□□□ -0.96
UBR1-204ENST00000563239 UBA3Q8TBC4 463 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 OVCA2Q8WZ82 227 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 SHC3Q92529 594 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 MRPS31Q92665 395 aaKnown RBP9.03□□□□□ -0.96
UBR1-204ENST00000563239 GCNAQ96QF7 691 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 LRFN3Q9BTN0 628 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 C1QTNF1Q9BXJ1 281 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 NAA15Q9BXJ9 866 aaKnown RBP9.03□□□□□ -0.96
UBR1-204ENST00000563239 UBXN6Q9BZV1 441 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 RNF38Q9H0F5 515 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 NMUR1Q9HB89 426 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 PNPLA8Q9NP80 782 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 OSER1Q9NX31 292 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 GMIPQ9P107 970 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 CHORDC1Q9UHD1 332 aaPredicted RBP9.03□□□□□ -0.96
UBR1-204ENST00000563239 DNAJC12Q9UKB3 198 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 TSPAN16Q9UKR8 245 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 USP3Q9Y6I4 520 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 ANAPC1Q9H1A4 1944 aa9.03□□□□□ -0.96
UBR1-204ENST00000563239 ZNF638Q14966 1978 aaKnown RBP9.03□□□□□ -0.96
UBR1-204ENST00000563239 COL4A2P08572 1712 aa9.02□□□□□ -0.96
UBR1-204ENST00000563239 NUP210Q8TEM1 1887 aaPredicted RBP9.02□□□□□ -0.96
UBR1-204ENST00000563239 WDFY4Q6ZS81 3184 aa9.02□□□□□ -0.96
UBR1-204ENST00000563239 PRR33A8MZF0 331 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 FOXN3O00409 490 aaPredicted RBP9.02□□□□□ -0.97
UBR1-204ENST00000563239 EPHB6O15197 1021 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 CYP26A1O43174 497 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 OAS1P00973 400 aaKnown RBP9.02□□□□□ -0.97
UBR1-204ENST00000563239 PNMA6AP0CW24 399 aaPredicted RBP9.02□□□□□ -0.97
UBR1-204ENST00000563239 PSMC3P17980 439 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 TRIM21P19474 475 aaKnown RBP9.02□□□□□ -0.97
UBR1-204ENST00000563239 PPP3CCP48454 512 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 ZNF165P49910 485 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 MFAP3P55082 362 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 PDE4CQ08493 712 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 ZNF268Q14587 947 aaPredicted RBP9.02□□□□□ -0.97
UBR1-204ENST00000563239 NFKBIBQ15653 356 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 ARHGAP44Q17R89 818 aa9.02□□□□□ -0.97
UBR1-204ENST00000563239 SKOR2Q2VWA4 1001 aaPredicted RBP9.02□□□□□ -0.97
UBR1-204ENST00000563239 TMEM31Q5JXX7 168 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms