RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 RSAD1Q9HA92 442 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 HOMER3Q9NSC5 361 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 TIMM13Q9Y5L4 95 aaPredicted RBP9.87□□□□□ -0.83
LINC00838-201ENST00000562956 TP73O15350 636 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 TRUB2O95900 331 aaKnown RBP9.87□□□□□ -0.83
LINC00838-201ENST00000562956 GNRH1P01148 92 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 KRT14P02533 472 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 LCP1P13796 627 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 PTPN1P18031 435 aaKnown RBP9.87□□□□□ -0.83
LINC00838-201ENST00000562956 RAB27AP51159 221 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 ATP11AP98196 1134 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 UPP1Q16831 310 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 CDO1Q16878 200 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 TRAF7Q6Q0C0 670 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 CYP4V2Q6ZWL3 525 aaPredicted RBP9.87□□□□□ -0.83
LINC00838-201ENST00000562956 FUKQ8N0W3 1084 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 HSPH1Q92598 858 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 LRRC45Q96CN5 670 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 HAUS1Q96CS2 278 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 RABEP2Q9H5N1 569 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 HMX1Q9NP08 348 aaPredicted RBP9.87□□□□□ -0.83
LINC00838-201ENST00000562956 NEU2Q9Y3R4 380 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 LIASO43766 372 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 KDELR1P24390 212 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 PCK1P35558 622 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 RPL34P49207 117 aaKnown RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 PTK6Q13882 451 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 MBTPS1Q14703 1052 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 PAQR9Q6ZVX9 377 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 PRUNE1Q86TP1 453 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 ART4Q93070 314 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 TSEN34Q9BSV6 310 aaKnown RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 TXLNGYQ9BZA5 131 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 DDX43Q9NXZ2 648 aaKnown RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 DNPEPQ9ULA0 475 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 PLAAQ9Y263 795 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 ATP8A1Q9Y2Q0 1164 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 FKTNO75072 461 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 PPFIA2O75334 1257 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 BEST1O76090 585 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 GRK4P32298 578 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 DYNLT1P63172 113 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 PAN2Q504Q3 1202 aaKnown RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 MDH1BQ5I0G3 518 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 KCTD6Q8NC69 237 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 SLAIN1Q8ND83 568 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 CMASQ8NFW8 434 aaPredicted RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 GRK7Q8WTQ7 553 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 UBLCP1Q8WVY7 318 aaPredicted RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 RUFY1Q96T51 708 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 HNRNPABQ99729 332 aaKnown RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 CRTAC1Q9NQ79 661 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 STARD7Q9NQZ5 370 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 SAE1Q9UBE0 346 aaPredicted RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 ASIC3Q9UHC3 531 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 INPP5FQ9Y2H2 1132 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 H0YGN5 161 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 I3L4J1 428 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 DPYSL4O14531 572 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 GAS8O95995 478 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 TFE3P19532 575 aaPredicted RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 IVDP26440 423 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 RPL9P32969 192 aaKnown RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 VPS41P49754 854 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 TAZQ16635 292 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 TIGD5Q53EQ6 642 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 DSTYKQ6XUX3 929 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 SYDE1Q6ZW31 735 aaPredicted RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 RTN4RL1Q86UN2 441 aaPredicted RBP9.86□□□□□ -0.83
LINC00838-201ENST00000562956 ECHDC2Q86YB7 292 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 ZDHHC17Q8IUH5 632 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 SLC43A3Q8NBI5 491 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 OR2W6PQ8NHA6 318 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 ARL8AQ96BM9 186 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 DUSP16Q9BY84 665 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 NFS1Q9Y697 457 aa9.86□□□□□ -0.83
LINC00838-201ENST00000562956 FAM163BP0C2L3 166 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 SDC4P31431 198 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 GBP1P32455 592 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 SNX16P57768 344 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 BYSLQ13895 437 aaKnown RBP9.85□□□□□ -0.83
LINC00838-201ENST00000562956 TTMPQ5BVD1 217 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 ZNF598Q86UK7 904 aaKnown RBP9.85□□□□□ -0.83
LINC00838-201ENST00000562956 PIGZQ86VD9 579 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 FAM172AQ8WUF8 416 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 NDRG1Q92597 394 aaKnown RBP9.85□□□□□ -0.83
LINC00838-201ENST00000562956 EXOC4Q96A65 974 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 ADAM33Q9BZ11 813 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 DNAI2Q9GZS0 605 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.85□□□□□ -0.83
LINC00838-201ENST00000562956 PTCH2Q9Y6C5 1203 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 SQORQ9Y6N5 450 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 XPO1O14980 1071 aaKnown RBP9.85□□□□□ -0.83
LINC00838-201ENST00000562956 OPA1O60313 960 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 CST8O60676 142 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 CAND2O75155 1236 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 B3GAT3O94766 335 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 NPR3P17342 541 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 RABGGTBP53611 331 aa9.85□□□□□ -0.83
LINC00838-201ENST00000562956 MMRN1Q13201 1228 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms