RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 PUM1Q14671 1186 aaKnown RBP eCLIP17.84■□□□□ 0.45
TNRC6A-209ENST00000562829 SGSM1Q2NKQ1 1148 aa17.84■□□□□ 0.45
TNRC6A-209ENST00000562829 DGLUCYQ7Z3D6 616 aa17.84■□□□□ 0.45
TNRC6A-209ENST00000562829 FAM35AQ86V20 835 aa17.84■□□□□ 0.45
TNRC6A-209ENST00000562829 NUP93Q8N1F7 819 aa17.84■□□□□ 0.45
TNRC6A-209ENST00000562829 TMC2Q8TDI7 906 aa17.84■□□□□ 0.45
TNRC6A-209ENST00000562829 SDCBP2Q9H190 292 aa17.84■□□□□ 0.45
TNRC6A-209ENST00000562829 FBRSL1Q9HCM7 1045 aaKnown RBP17.84■□□□□ 0.45
TNRC6A-209ENST00000562829 MAPK8IP1Q9UQF2 711 aa17.84■□□□□ 0.45
TNRC6A-209ENST00000562829 CPQQ9Y646 472 aa17.84■□□□□ 0.45
TNRC6A-209ENST00000562829 RHOBTB3O94955 611 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 RTN3O95197 1032 aaPredicted RBP17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 MBL2P11226 248 aaPredicted RBP17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 TCF3P15923 654 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 NR2F2P24468 414 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 YWHAQP27348 245 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 PXNP49023 591 aaPredicted RBP17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 SPEM2Q0P670 501 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 ORC1Q13415 861 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 RSPO4Q2I0M5 234 aaPredicted RBP17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 ZACNQ401N2 412 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 FBXO43Q4G163 708 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 KRBA2Q6ZNG9 492 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 SV2AQ7L0J3 742 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 ACOT1Q86TX2 421 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 WDR5BQ86VZ2 330 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 FBXO32Q969P5 355 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 SMARCD1Q96GM5 515 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 KCNK16Q96T55 309 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 IMPG2Q9BZV3 1241 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 LINC00597Q9H2U6 94 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 GDPD2Q9HCC8 539 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 DMAP1Q9NPF5 467 aaPredicted RBP17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.83■□□□□ 0.447e-11■■■■■ 48.9
TNRC6A-209ENST00000562829 KRT82Q9NSB4 513 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 TRAF3IP3Q9Y228 551 aa17.83■□□□□ 0.44
TNRC6A-209ENST00000562829 FAM237AA0A1B0GTK4 181 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 SCAMP3O14828 347 aaKnown RBP17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 AP1G2O75843 785 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 HLA-DRAP01903 254 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 RETP07949 1114 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 VAMP7P51809 220 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 SLC7A9P82251 487 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 ZXDBP98169 803 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 LMNB2Q03252 620 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 DPYDQ12882 1025 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 SPOPLQ6IQ16 392 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 PDZD8Q8NEN9 1154 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 RPLP0P6Q8NHW5 317 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 TMEM174Q8WUU8 243 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 TAF4BQ92750 862 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 RNF38Q9H0F5 515 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 GOLPH3LQ9H4A5 285 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 MMRN2Q9H8L6 949 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 PARD6AQ9NPB6 346 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 MYH10P35580 1976 aa17.82■□□□□ 0.44
TNRC6A-209ENST00000562829 A0A1W2PQ27 194 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 A0A1W2PQ64 194 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 A0A1W2PQD8 194 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 IKBKBO14920 756 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 OAS1P00973 400 aaKnown RBP17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 TRIM49P0CI25 452 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 TRIM49CP0CI26 452 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 KRT13P13646 458 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 CCDC130P13994 396 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 TRIM21P19474 475 aaKnown RBP17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 HOXA6P31267 233 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 NDST1P52848 882 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 SLC5A3P53794 718 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 FILIP1Q7Z7B0 1213 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 CCDC34Q96HJ3 373 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 HHIPQ96QV1 700 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 POLR3BQ9NW08 1133 aaPredicted RBP17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 CFAP97Q9P2B7 532 aa17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 CDV3Q9UKY7 258 aaKnown RBP17.81■□□□□ 0.44
TNRC6A-209ENST00000562829 SLC9A3R1O14745 358 aaPredicted RBP17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 MAPK13O15264 365 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 AKAP3O75969 853 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 ZNF202O95125 648 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 OLFM2O95897 454 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 ASS1P00966 412 aaKnown RBP17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 CCDC192P0DO97 292 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 RPL13P26373 211 aaKnown RBP17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 PAQR9Q6ZVX9 377 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 INTS8Q75QN2 995 aaKnown RBP17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 DDX42Q86XP3 938 aaKnown RBP eCLIP17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 FAM186BQ8IYM0 893 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 FUKQ8N0W3 1084 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 FAM160A2Q8N612 972 aaPredicted RBP17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 SCAMP5Q8TAC9 235 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 SLC2A14Q8TDB8 520 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 OVCA2Q8WZ82 227 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 ACDQ96AP0 544 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 NACA2Q9H009 215 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 FAM49BQ9NUQ9 324 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 DLL3Q9NYJ7 618 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 HMGXB4Q9UGU5 601 aa17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 CHORDC1Q9UHD1 332 aaPredicted RBP17.8■□□□□ 0.44
TNRC6A-209ENST00000562829 RALGAPA1Q6GYQ0 2036 aa17.79■□□□□ 0.44
TNRC6A-209ENST00000562829 CEP250Q9BV73 2442 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms