RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CST8O60676 142 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 RBP3P10745 1247 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 PECAM1P16284 738 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 AKAP5P24588 427 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 CYP2C18P33260 490 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 SLC11A2P49281 568 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 FOXD4Q12950 439 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 CCDC6Q16204 474 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 GEN1Q17RS7 908 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 NOP9Q86U38 636 aaKnown RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 PHF13Q86YI8 300 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 JAMLQ86YT9 394 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 ARHGAP24Q8N264 748 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 TMEM199Q8N511 208 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 ATPAF2Q8N5M1 289 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 ANKRD42Q8N9B4 389 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 LRRC8CQ8TDW0 803 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 CRYGNQ8WXF5 182 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 ERP44Q9BS26 406 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 BRD8Q9H0E9 1235 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 TRPM5Q9NZQ8 1165 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 COQ4Q9Y3A0 265 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 MYH6P13533 1939 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 LRG1P02750 347 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 NFICP08651 508 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 FAM163BP0C2L3 166 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 SELPP16109 830 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 FGFR4P22455 802 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 ATN1P54259 1190 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 GNGT1P63211 74 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 TFDP3Q5H9I0 405 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 GRAMD4Q6IC98 578 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 DCLRE1AQ6PJP8 1040 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 ABTB1Q969K4 478 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 IFT43Q96FT9 208 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 NUDCD1Q96RS6 583 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 DDIT4Q9NX09 232 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 MAGED2Q9UNF1 606 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 PPM1AP35813 382 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 MBTD1Q05BQ5 628 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 TUSC3Q13454 348 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 HIF1AQ16665 826 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 NOMO2Q5JPE7 1267 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 CYP4A22Q5TCH4 519 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 ANKRD20A3Q5VUR7 823 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 LRIG3Q6UXM1 1119 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 NANOGNBQ7Z5D8 188 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 SRRM1Q8IYB3 904 aaKnown RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 TAB3Q8N5C8 712 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 HNRNPLLQ8WVV9 542 aaKnown RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 MRPS31Q92665 395 aaKnown RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 FBXO32Q969P5 355 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 TSEN34Q9BSV6 310 aaKnown RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 ISCUQ9H1K1 167 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 KLHL14Q9P2G3 628 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 TBKBP1A7MCY6 615 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 ATMINO43313 823 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 ASGR1P07306 291 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 MSL3P1P0C860 447 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 COILP38432 576 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 DRP2Q13474 957 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 TAF1BQ53T94 588 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 PHLDB3Q6NSJ2 640 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 CAPN12Q6ZSI9 719 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 PID1Q7Z2X4 250 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 RAB44Q7Z6P3 723 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 SCG3Q8WXD2 468 aaKnown RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 SHISA4Q96DD7 197 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 XAB2Q9HCS7 855 aaKnown RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 C6orf203Q9P0P8 240 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 FBXO9Q9UK97 447 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 PCDHB8Q9UN66 801 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.86□□□□□ -1.15
TCF4-216ENST00000562680 SF3B1O75533 1304 aaKnown RBP eCLIP7.86□□□□□ -1.154e-7■■■■■ 86.2
TCF4-216ENST00000562680 CASTOR2A6NHX0 329 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 C3orf70A6NLC5 250 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 PI4K2BG5E9Z4 385 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 M0QYT0 321 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 FDFT1P37268 417 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 RASSF2P50749 326 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 APLP1P51693 650 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 NEK2P51955 445 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 DLG4P78352 724 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 DMPKQ09013 629 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 AP1B1Q10567 949 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 MDH1BQ5I0G3 518 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 CACNA2D3Q8IZS8 1091 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 SPATA18Q8TC71 538 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 TSPAN1O60635 241 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 MICAL2O94851 1124 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 F2P00734 622 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 HNRNPCP07910 306 aaKnown RBP eCLIP7.86□□□□□ -1.15
TCF4-216ENST00000562680 SSTR3P32745 418 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 BTG3Q14201 252 aaPredicted RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 CCNG2Q16589 344 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 CCDC62Q6P9F0 684 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 DAW1Q8N136 415 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 UHMK1Q8TAS1 419 aaKnown RBP7.86□□□□□ -1.15
TCF4-216ENST00000562680 RXFP2Q8WXD0 754 aa7.86□□□□□ -1.15
TCF4-216ENST00000562680 LRRC1Q9BTT6 524 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms